Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g1060 ATGGGTTTTGGAGTAAGGAGGTTATTTACAAACAAAAGTAAGAAAGATGGATCAATCACTACTTGTAGGTTTGTTTGTTGCAAAGAAGGAGTAAGAAGAGCAAATAAAGGAGTTCATAATGTTGTGAATCGTCGACAGGAAACAAGAACCGATTGCACAGTTAAAATGGGACTTGTGAATGAGGATGGGAAATTTAAGGTGTATGATTTAGTGGAGGAGCATAACCATGTTTTACATCTTCCAAATACAACACACATGCTTCCCTCTCATCGCAGGATATCAGACGTCCAAGCACAGGAGATTGAATTGGTTGCAGATTCTGGGTTACAACAAAGAGCGGCATATGAGTTTCTTAGTAGAGAAGCAGGTGGAAGAGGATTCAATCATTTCAAGGGAGGGGTAATTTCTGGGGCAGCTTTGTTGTATGATGAGACAACGGTATCTTTCAAGTGGTTGTTTGAGACTTTTTTGAAAGCCAATTTGCAAAAAAGACCCCAGACGATTTTCACTGATCAGGATCAAGCTATGGCTAAGGCATTACGTGAGGTTATGCCTGAGGTTTACCACGGTTTATGCACTTGGCATCTAATGCAAAATGGCATCAAACACCTAGGCAACTTGATGAAAGGAGGGTCTCATTTTCTACGGGACTTTAAGTCCTTTGCAAAGGTGTACACTCCTCCTATATTTGACGAGTTTCAATATGAATTCAACATTTCCCTTGCTTGttctataaagtataaacatgaGAGTGAAGCAGGCTTTGAATATGGCATCATTATTGTTGGTCGAGAAGTAGAGTTTAGAGTATTGTTTAATCCTCCTCAAAAGGCGGTGTCTTATAGTTGTAAGAGGTTTGAAAACTTTGGTCTGAATGATTTGCGTAAGCAAGCCGAGGAGCTTCTCGAAAGGGAAAAAGATGTGAACAATTTCAGGGATGATTCTATACCACCCATGAGTGCATGCACGTCACAACCGATGAGTGCATCCTCTTCACAACCCATGGGTGCATCCTCATCACAACCAAAGGGGATCAAGAAAAGGCAAGGCAATAAGAGGACGAGATGCTATAAAAATTGGGTTGGTCAGAGGAAAAGGACACAAAGGGTCCCAAATTCGCATAGTCAGAGATCTATAGAACCTCTTAACCTTTCTACACTATCACTTGGAGGGTTCCAGTTAGATGGAGATAATTCAAATGTGCATGACCAAGCTAGTCAACAATCATAG 1230 0.4049 MGFGVRRLFTNKSKKDGSITTCRFVCCKEGVRRANKGVHNVVNRRQETRTDCTVKMGLVNEDGKFKVYDLVEEHNHVLHLPNTTHMLPSHRRISDVQAQEIELVADSGLQQRAAYEFLSREAGGRGFNHFKGGVISGAALLYDETTVSFKWLFETFLKANLQKRPQTIFTDQDQAMAKALREVMPEVYHGLCTWHLMQNGIKHLGNLMKGGSHFLRDFKSFAKVYTPPIFDEFQYEFNISLACSIKYKHESEAGFEYGIIIVGREVEFRVLFNPPQKAVSYSCKRFENFGLNDLRKQAEELLEREKDVNNFRDDSIPPMSACTSQPMSASSSQPMGASSSQPKGIKKRQGNKRTRCYKNWVGQRKRTQRVPNSHSQRSIEPLNLSTLSLGGFQLDGDNSNVHDQASQQS 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g1060 409 Pfam MULE transposase domain 126 199 IPR018289 -
Sto2g1060 409 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 221 291 IPR031052 GO:0006355
Sto2g1060 409 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 126 219 IPR031052 GO:0006355
Sto2g1060 409 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 1 115 IPR031052 GO:0006355
Sto2g1060 409 Pfam FAR1 DNA-binding domain 1 78 IPR004330 -
Sto2g1060 409 Coils Coil 291 311 - -
Sto2g1060 409 PANTHER OS03G0181600 PROTEIN 126 219 - -
Sto2g1060 409 PANTHER OS03G0181600 PROTEIN 221 291 - -
Sto2g1060 409 PANTHER OS03G0181600 PROTEIN 1 115 - -
Sto2g1060 409 MobiDBLite consensus disorder prediction 316 345 - -
Sto2g1060 409 MobiDBLite consensus disorder prediction 346 362 - -
Sto2g1060 409 MobiDBLite consensus disorder prediction 365 409 - -
Sto2g1060 409 MobiDBLite consensus disorder prediction 308 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g1060 Sto-Chr2 9257740 9260066 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sto2g1060 FAR1 4.3e-15 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g1060 - - tss:122643517 245.743