Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g1014 ATGTCCAAGCGAGTGAGTGAAGAAGCCAAGAGCCACGACCACCATGCCAAAGACTACACAGATCCACCACCCGCTCCTCTCATCGACTTCGCTGAGCTCAAGCTCTGGTCCTTCTACCGAGCCCTCATCGCTGAGTTCATCGCCACCCTCCTCTTCCTCTACGTCACCGTCGCCACCCTCACCAGCCAACCCGCACCCTGCGACGGCGGCGTCGGTGCTCTCGGCATCGCTTGGGCCTTCGGTGGCATGATCTTCGTCCTCGTCTACTGCACCGCCGGCATCTCCGGTGGACACATCAACCCCGCGGTGACGTTCGGTTTGCTCCTGGCTCGGAAGGTGTCGCTGACTCGAGCCGCGGCGTACGTGGTGGCTCAGTGCAGCGGAGCCATTTGCGGCGTTGGGTTGGTGAAGGCGTTGATGAAACATTCGTACAACTCTGTGGGAGGAGGCGCCAATGCTGTGTCTGCTGGCTATGACAAAGGAACCGCTTTGGGTGCTGAGATTATGGGTACCTTCGTGCTTGTCTACACCGTCTTCTCCGCCACCGACCCCAAGAGAAACGCCCGTGACTCCCATGTCCCTGTTCTGGCTCCATTGCCGATTGGATTTGCGGTTTTCGTGGTTCACTTGGCCACCATACCCATCACTGGTACGGGTATAAACCCAGCTAGGAGTTTCGGTGCTGCTGTTATCTACAACAATGCTAGAGTCTGGGATGACCATTGGATATTTTGGGTTGGACCATTTGTGGGAGCAATGGGGGCTGCAGCATACCATCAGTGTGTACTGAGGGCAGTGGCTATGAAGGCATTGGGATCATTCCAAAGCAACCCCTCCAACTAG 843 0.5706 MSKRVSEEAKSHDHHAKDYTDPPPAPLIDFAELKLWSFYRALIAEFIATLLFLYVTVATLTSQPAPCDGGVGALGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLLLARKVSLTRAAAYVVAQCSGAICGVGLVKALMKHSYNSVGGGANAVSAGYDKGTALGAEIMGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFVVHLATIPITGTGINPARSFGAAVIYNNARVWDDHWIFWVGPFVGAMGAAAYHQCVLRAVAMKALGSFQSNPSN 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g1014 280 CDD MIP 40 260 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto2g1014 280 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 1 280 IPR034294 -
Sto2g1014 280 SUPERFAMILY Aquaporin-like 32 263 IPR023271 -
Sto2g1014 280 Pfam Major intrinsic protein 33 258 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto2g1014 280 PRINTS Major intrinsic protein family signature 40 59 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto2g1014 280 PRINTS Major intrinsic protein family signature 80 104 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto2g1014 280 PRINTS Major intrinsic protein family signature 117 136 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto2g1014 280 PRINTS Major intrinsic protein family signature 166 184 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto2g1014 280 PRINTS Major intrinsic protein family signature 202 224 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto2g1014 280 PRINTS Major intrinsic protein family signature 242 262 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto2g1014 280 MobiDBLite consensus disorder prediction 1 20 - -
Sto2g1014 280 TIGRFAM MIP: MIP family channel proteins 44 258 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto2g1014 280 Gene3D Glycerol uptake facilitator protein. 25 280 IPR023271 -
Sto2g1014 280 ProSitePatterns MIP family signature. 98 106 IPR022357 -
Sto2g1014 280 PANTHER AQUAPORIN PIP-TYPE-RELATED 1 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g1014 Sto-Chr2 8940297 8942149 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g1014 1 280 Major Intrinsic Protein MIP AT4G35100 80.212 9.63e-166 459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g1014 K09872 - cit:102624436 472.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto2g1014 2 8940297 8942149 Sto2g1014 2 8940297 8942149 ECH