Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g0950 ATGAATTGCAGAAAACATCTTGATTTgGGTGAGGAGAAAGCTGAAGAGGAGCCTGAAATTACTCACAGAGTATTCTTGGATGTCGATATTGATGAACAACGTTTAGGTAGGATTATTGTTGGATTATATGGCCAAGTTGTACCTAAAACTGTGGAAAATTTTAGAGCTTTGTGCACAGGGGAGAAAGGCAAGAATTCTAATGGTGTAAAACTTCATTATAAAGGAACACCATTTCATCGCATAATATCTGGTTTCGTGATTCAGGGTGGGGACATTGTTCATCGTGATGGCACTGGATATGAATCCATTTATGGTGGCACCTTTCCTGATGAGAATTTCAAGATAAAAAATTCACATGCTGGTCTCTCTTTGAAAATTCACTCCATGCTTGCAGGGGTTGTCTCTATGGTGAATTCAGGACCTGATTCCAATGGTTCACAGTTTTTTATCACCACAGTGAAGGCCAGCTGGTTGGATGGAGAACATGTTGTGTTTGGGAAGGTGATAGAAGGCATGGACAATGTGTTTGCAATAGAAGGGAGTGCTGGAACTTACAATGGGAAACCCAGAAAGAAGGTAATAATATCTGACTCTGGAGAGATACCCCCAAGCCAATGGGACCAGCCAGGATGA 633 0.4123 MNCRKHLDLGEEKAEEEPEITHRVFLDVDIDEQRLGRIIVGLYGQVVPKTVENFRALCTGEKGKNSNGVKLHYKGTPFHRIISGFVIQGGDIVHRDGTGYESIYGGTFPDENFKIKNSHAGLSLKIHSMLAGVVSMVNSGPDSNGSQFFITTVKASWLDGEHVVFGKVIEGMDNVFAIEGSAGTYNGKPRKKVIISDSGEIPPSQWDQPG 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g0950 210 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 73 90 IPR020892 GO:0003755|GO:0006457
Sto2g0950 210 Gene3D - 11 206 IPR029000 -
Sto2g0950 210 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 7 208 - -
Sto2g0950 210 PIRSF Peptidylpro_ismrse 12 205 IPR024936 GO:0003755
Sto2g0950 210 SUPERFAMILY Cyclophilin-like 19 201 IPR029000 -
Sto2g0950 210 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 28 197 IPR002130 GO:0000413|GO:0003755
Sto2g0950 210 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 7 208 - -
Sto2g0950 210 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 42 57 IPR002130 GO:0000413|GO:0003755
Sto2g0950 210 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 78 90 IPR002130 GO:0000413|GO:0003755
Sto2g0950 210 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 132 147 IPR002130 GO:0000413|GO:0003755
Sto2g0950 210 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 147 159 IPR002130 GO:0000413|GO:0003755
Sto2g0950 210 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 160 175 IPR002130 GO:0000413|GO:0003755
Sto2g0950 210 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 25 200 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g0950 Sto-Chr2 8198024 8202382 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g0950 36 195 U-box Gene Family AT5G67530 38.509 8.51e-22 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g0950 - - gmx:100800775 333.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto2g0950 2 8198024 8202382 Sto2g0950 2 8198024 8202382 ECH