Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g0911 ATGGTTACCTCATCTCCGTCACAATTCGGCCACGTGTCCCAATCCAACGAATTCTTCCATATTCTCTCTGCAATATCAATGGGAAACCCTAAGGTCTTCTTCGATATGACCATCGGCGGCCAGCCGGCCGGCCGAATCGTCATGGAGCTCTTCGCCGACGTCACTCCGAGGACCGCCGAGAACTTCCGCGCCCTCTGCACCGGCGAGAAGGGAACCGGCCGGAGCGGCAAGCCGCTTCACTACAAGGGATCCTCCTTCCACCGTGTGATCCCTAACTTCATGTGCCAGGGCGGCGACTTCACCGCCGGGAACGGCACCGGCGGCGAGTCGATCTACGGCTCCAAGTTCGCCGACGAGAACTTcgtgaagaagcacaccggccCCGGGATCCTGTCCATGGCCAATGCCGGGCCGGGGACGAACGGATCGCAGTTCTTCATCTGCACGGCCAAGACGGAATGGCTCGACGGGAAGCACGTGGTGTTCGGTCAGGTCGTGGAAGGCATGAACGTCGTGAAGGATATCGAGAAGGTCGGATCGAGCTCCGGCCGGACCGCGAGGCCGGTGGTCAGGGTAGActcacaaattagagaaagaaaaggGCTTGGAAATTGGTATAGTAAAGATTAG 630 0.554 MVTSSPSQFGHVSQSNEFFHILSAISMGNPKVFFDMTIGGQPAGRIVMELFADVTPRTAENFRALCTGEKGTGRSGKPLHYKGSSFHRVIPNFMCQGGDFTAGNGTGGESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFICTAKTEWLDGKHVVFGQVVEGMNVVKDIEKVGSSSGRTARPVVRVDSQIRERKGLGNWYSKD 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g0911 209 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 33 190 IPR002130 GO:0000413|GO:0003755
Sto2g0911 209 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 50 65 IPR002130 GO:0000413|GO:0003755
Sto2g0911 209 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 86 98 IPR002130 GO:0000413|GO:0003755
Sto2g0911 209 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 129 144 IPR002130 GO:0000413|GO:0003755
Sto2g0911 209 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 144 156 IPR002130 GO:0000413|GO:0003755
Sto2g0911 209 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 157 172 IPR002130 GO:0000413|GO:0003755
Sto2g0911 209 CDD cyclophilin_ABH_like 30 194 - -
Sto2g0911 209 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 27 193 - -
Sto2g0911 209 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 1 27 193 - -
Sto2g0911 209 SUPERFAMILY Cyclophilin-like 21 196 IPR029000 -
Sto2g0911 209 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 33 192 IPR002130 GO:0000413|GO:0003755
Sto2g0911 209 Gene3D - 23 200 IPR029000 -
Sto2g0911 209 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 81 98 IPR020892 GO:0003755|GO:0006457
Sto2g0911 209 PIRSF Peptidylpro_ismrse 14 200 IPR024936 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g0911 Sto-Chr2 7884438 7886389 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g0911 44 200 U-box Gene Family AT5G67530 44.937 4.52e-30 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g0911 K01802 - gmx:106795232 322.013
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto2g0911 2 7884438 7886389 Sto2g0911 2 7884438 7886389 ECH