Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g0859 ATGAGTTCAGGATGCAGCATAAATATATGTCTGTTATGGCTTGCATCAACGTTGATTCTCATACTTGGAGCATCAAAGGAAGTAGTTGTGCGACCCGATATTGTGAAAATTGGTGCTATTTTCACACTCAAAACTATAAATGGAAAAGTTTCCAAAATTGCCATCAAAGCTGCTGAGGAAGATGTGAATTCTGATCCTCGCATCCTTGGTGGACGTAAATTGTCCATAACCATGCACGATTCTAACTTCAGCGGTTTTCTTGGCTTCATTGGCGCGCTCAAGTTCTTGGGAAGCGGCAGCGTAGCCATTATTGGTCCACAAAACTCAGTAATGGCCCATGTACTCTCACATCTTGcaaatgaactccatgtccctctGTTGTCGTTCACAGCATTAGATCCCACCCTGTCACCTCTGCAGTACCCTTATTTTGTACAAACAGCTCCTAATGATCAGTTCCAGATGACTGCAGTTGCAGACATGATTAACTATTTTGGTTGGAGGGAGATTATTGCCGTTTTTAGTGACGATGATCAGAGTCGAAACGGTATAAATGTGTTGGGGGATAAACTTGCAGAAAGGCGTTGTAAGATATCTTACAAAGCAATACTCCCCCCAGATCCAACTGCTAGTCAAAGCAATATCACTACTCAGTTGACCATGGTTCAAAGCATGGAAGCTCGAGTAATTGTTCTGCACACCTACTCCAAAACAGGTCGCTTGGTTTTTGATGTGGCTCAGAAACTAAGGATGATGGGTGAAGGGTATGTCTGGATAGCTACTTCTTGGTTATCAACGGTTTTAGACTCAACTCCACTTCCTTTAGATGTGTCTTACTCAATCAAAGGAGTTGTTACACTTCGCCCTCACACCCCTCAATCAAAAAGAAAACAGGACTTTATGTCAAGGTGGAATCATATGAGTAATCGTTCAATTGGCTTGAATCCATATGGACTCTACGCTTATGACTCTGTTTGGATGATTGCTTTTGCATTGAAATCATTTTTCGATCAGAACGGTCCTATTCAATTTGGCTCGGATAGATCCCCCTTACATCCATCATATGATATCCTTAATGTAATTACCGGAGGTTATAGAAAGATTGGGTATTGGTCTAATTATTCCGGGCTATCTGTTGTTACTCCTGAGAAACTCTATACAAAGGCTGCCAACCGTTCAATTTCAAACCAGCATCTATCTCGTGTGATTTGGCCTGGTGGTACAACAGAAAAGCCTCGTGGATGGGTTTTCCCAAATAATGGAAGGCAACTAAGAATTGGAGTTCCCAATCGAGTTAGTTATCAGAACATTGTCTCCCAAATAAATGGTACCAATACAATTCAAGGATACTGCATTGATGTATTCCTGGCTGCCATAAAATTGCTACCATACGCAGTTCCGTATAGGTTTGTTCTGTTTGGAGATGGACATAAGAATCCCAGCTACTATGACCTTGTCAATATGATTACTTCTGATGTTTTCGATGCTGCTGTAGGCGACATTACAATTGTCACTGACCGAACAAAAATGGCAGATTTTACTCAACCATATATAGAATCAGGATTGGTTGTGGTTGCAAAAGTCAAAACACTAAAGTCAAGTGCTTGGGCTTTCTTGCGACCATTTACTCCAATAATGTGGGGTGTTACAGCTGTTTTTTTCCTCATTGTTGGAGCAGTTGTGTGGATTCTTGAACATAGAACAAATGATGAGTTCCGGGGGCCTCCAAGGAAACAAATCGTTACAATTCTTTGGTTTAGCCTCTCCACCATGTTCTTTGCACACAGAGAAAACACAGTTAGTGCACTTGGTCGTATTGTACTAGTCATCTGGCTTTTCGTGGTTCTAGTAATTAATTCAAGCTATACTGCAAGCCTAACATCAATTCTCACGGTTCAACAGCTTTCCTCACCCATAACAGGAATTGATACCTTGATCACCAGTAATGAACCTATAGGATTTCAACAAGGGTCATTTGCTGAAAATTATCTTATTCAGGAACTCAACATCCCAAAACATAGACTTGTTCCTCTAGGCTCACCGATAGAATATGCTATTGCTCTTGAGAAGGGAACTGTTGCCGCTGTCGTAGATGAACGGCCATATGTAGAACTCTTCTTGTCGGAATCGGATAATTGCAAATTTTCTATTCGAGGCCAAGAGTTCACCAAAAGTGGATGGGGATTTGTGAGTATCTCGAGTtga 2205 0.4082 MSSGCSINICLLWLASTLILILGASKEVVVRPDIVKIGAIFTLKTINGKVSKIAIKAAEEDVNSDPRILGGRKLSITMHDSNFSGFLGFIGALKFLGSGSVAIIGPQNSVMAHVLSHLANELHVPLLSFTALDPTLSPLQYPYFVQTAPNDQFQMTAVADMINYFGWREIIAVFSDDDQSRNGINVLGDKLAERRCKISYKAILPPDPTASQSNITTQLTMVQSMEARVIVLHTYSKTGRLVFDVAQKLRMMGEGYVWIATSWLSTVLDSTPLPLDVSYSIKGVVTLRPHTPQSKRKQDFMSRWNHMSNRSIGLNPYGLYAYDSVWMIAFALKSFFDQNGPIQFGSDRSPLHPSYDILNVITGGYRKIGYWSNYSGLSVVTPEKLYTKAANRSISNQHLSRVIWPGGTTEKPRGWVFPNNGRQLRIGVPNRVSYQNIVSQINGTNTIQGYCIDVFLAAIKLLPYAVPYRFVLFGDGHKNPSYYDLVNMITSDVFDAAVGDITIVTDRTKMADFTQPYIESGLVVVAKVKTLKSSAWAFLRPFTPIMWGVTAVFFLIVGAVVWILEHRTNDEFRGPPRKQIVTILWFSLSTMFFAHRENTVSALGRIVLVIWLFVVLVINSSYTASLTSILTVQQLSSPITGIDTLITSNEPIGFQQGSFAENYLIQELNIPKHRLVPLGSPIEYAIALEKGTVAAVVDERPYVELFLSESDNCKFSIRGQEFTKSGWGFVSISS 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g0859 734 SUPERFAMILY Periplasmic binding protein-like II 401 730 - -
Sto2g0859 734 SUPERFAMILY Periplasmic binding protein-like I 31 416 IPR028082 -
Sto2g0859 734 Pfam Ligand-gated ion channel 546 649 IPR001320 GO:0015276|GO:0016020
Sto2g0859 734 CDD PBP1_GABAb_receptor_plant 36 380 IPR044440 -
Sto2g0859 734 Gene3D - 320 423 - -
Sto2g0859 734 SMART GluR_14 425 734 IPR001320 GO:0015276|GO:0016020
Sto2g0859 734 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 340 730 - -
Sto2g0859 734 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 22 344 - -
Sto2g0859 734 Gene3D - 536 658 - -
Sto2g0859 734 Pfam Receptor family ligand binding region 53 335 IPR001828 -
Sto2g0859 734 Gene3D - 152 319 - -
Sto2g0859 734 Pfam Bacterial extracellular solute-binding proteins, family 3 443 730 IPR001638 -
Sto2g0859 734 Gene3D - 424 535 - -
Sto2g0859 734 PANTHER GLUTAMATE RECEPTOR 3.6 22 344 - -
Sto2g0859 734 PANTHER GLUTAMATE RECEPTOR 3.6 340 730 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g0859 Sto-Chr2 7469670 7476013 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g0859 30 731 Ion Channels AT4G35290 62.983 0.0 973
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g0859 K05387 - gmx:100793969 1157.9