Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g0838 ATGGCTACATCAACAAATATCTCCACTTTTTCATCTTCCTTCCTCAAACCTCCCTCTCTACCTCTGACCACCACAACCACCACTACTTCTCTCCCTCCCAAAACCCTCCCAAAACCCTCTCTTTCCCACGCCGCCGTCCACGGCGGCGACACCCACAAATCCCCCTTCGCCCTTTCCTCCAAAAACCCGATTTCCGATCTCGTACGTGCACACGAACCCCACCCACATCACGAACCAGACCCAGAATCGAAATCAAAATCCCACTatgacgacgacgacgatgacGAAAAACCCCGCGAGGAGTGTGGTGTGGTGGGTATATACGGCGACCCAGAGGCGTCTCGTCTCTGCTATTTGGCCCTTCACGCGCTGCAGCATCGCGGCCAAGAAGGGGCCGGGATCGTCGCCGTTCACAACAACGTCCTCCAATCGATCACCGGCGTAGGTCTCGTCTCCGACGTGTTCAACGAATCCAAGCTCGACCAATTACCTGGAAGTTTGGCTATTGGGCATGTTCGTTATTCCACCGCAGGGCAATCGATGTTGAAAAATGTCCAACCTTTCGTTGCAGGGTATCGCTTTGGGTCCGTCGGGATTGCTCACAATGGTAATTTGGTGAATTATAGGACCTTAAGAGCGAAGCTTGAGAAAGATGGGTCGATTTTCAACACTAGTTCTGATACTGAGGTTGTTCTGCATCTGATTGCGACCTCTAAGCATAGGCCTTTCATTCTGAGGATTGTGGATGCGTGTGAGAAGATTCAAGGTGCGTATTCTATTGTGTTTGTGACTGAGGATAAGCTTGTTGCTGTGAGGGATCCCTTTGGGTTTCGTCCTCTGGTTATGGGGAGAAGAAGCAATGGTTCTGTAGTGTTTGCTTCTGAGACTTGTGCTCTTGATTTGATTGAAGCAACATATGAGAGGGAAGTGTATCCTGGTGAGGTTGTAGTGGTGGACAAAGATGGGATTCAATCTCTTTGCTTAATGTCTCATCCACAGCCAAAGCAATGCATATTTGAGCACATTTACTTTTCTCTTCCGAACTCTGTGGTTTTTGGGAGATCAGTGTATGAATCAAGGAGAAAATTTGGGGAAATTCTGGCCACTGAAAGTCCTGTTGATTGTGATGTTGTAATAGCAGTTCCTGATTCGGGTGTGGTAGCTGCATTAGGCTATGCTGCAAAAGCGGGAGTCCCTTTCCAACAAGGGCTAATCAGGTCCCACTATGTGGGAAGGACTTTCATTGAGCCATCTCAGAAGATTAGGGACTTTGGAGTGAAGCTGAAGCTATCACCGGTTCGCGCAGTGCTCGAAGGAAAGAGGGTTGTGGTTGTGGATGATTCGATCGTGAGAGGGACGACGTCTTCCAAAATAGTGAGGATGATAAAGGAAGCAGGTGCTAAAGAGGTTCATATGAGAATTGCAAGCCCTCCAATTATAGGGTCATGCTACTATGGGGTGGACACACCGAGTTCGGAGGAGTTGATATCTAATAGAATGAGCACTGAGGAAATTAGGGAGTTCATTGGGTCTGATTCACTTGCTTTTCTTCCATTTGATAGCTTGAAGAAGCTTTTGGCCAATGATTCTCCTAATTATTGCTATGCTTGCTTTTCTGGGAATTATCCTGTTGAGCCTAGAGAGCTTAAAGTGAAGAGGGTTGGTGACTTTGTGGATGATGGCTTGAATGGGAGTTTGGaatccattgatggaggttgggtTCAAGCAAACCCTACCCCAAAAGAGGTAAAGGTTGTTGGTCTCTAA 1767 0.4646 MATSTNISTFSSSFLKPPSLPLTTTTTTTSLPPKTLPKPSLSHAAVHGGDTHKSPFALSSKNPISDLVRAHEPHPHHEPDPESKSKSHYDDDDDDEKPREECGVVGIYGDPEASRLCYLALHALQHRGQEGAGIVAVHNNVLQSITGVGLVSDVFNESKLDQLPGSLAIGHVRYSTAGQSMLKNVQPFVAGYRFGSVGIAHNGNLVNYRTLRAKLEKDGSIFNTSSDTEVVLHLIATSKHRPFILRIVDACEKIQGAYSIVFVTEDKLVAVRDPFGFRPLVMGRRSNGSVVFASETCALDLIEATYEREVYPGEVVVVDKDGIQSLCLMSHPQPKQCIFEHIYFSLPNSVVFGRSVYESRRKFGEILATESPVDCDVVIAVPDSGVVAALGYAAKAGVPFQQGLIRSHYVGRTFIEPSQKIRDFGVKLKLSPVRAVLEGKRVVVVDDSIVRGTTSSKIVRMIKEAGAKEVHMRIASPPIIGSCYYGVDTPSSEELISNRMSTEEIREFIGSDSLAFLPFDSLKKLLANDSPNYCYACFSGNYPVEPRELKVKRVGDFVDDGLNGSLESIDGGWVQANPTPKEVKVVGL 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g0838 588 CDD GPATase_N 102 352 IPR035584 -
Sto2g0838 588 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 102 325 IPR029055 -
Sto2g0838 588 Hamap Amidophosphoribosyltransferase [purF]. 101 542 IPR005854 GO:0004044|GO:0009113
Sto2g0838 588 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 2, CHLOROPLASTIC 85 574 - -
Sto2g0838 588 TIGRFAM purF: amidophosphoribosyltransferase 102 543 IPR005854 GO:0004044|GO:0009113
Sto2g0838 588 MobiDBLite consensus disorder prediction 67 102 - -
Sto2g0838 588 MobiDBLite consensus disorder prediction 1 102 - -
Sto2g0838 588 CDD PRTases_typeI 364 475 IPR000836 -
Sto2g0838 588 Pfam Glutamine amidotransferase domain 180 299 IPR017932 -
Sto2g0838 588 MobiDBLite consensus disorder prediction 1 36 - -
Sto2g0838 588 Pfam Phosphoribosyl transferase domain 361 471 IPR000836 -
Sto2g0838 588 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 102 543 IPR029055 -
Sto2g0838 588 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 102 321 IPR017932 -
Sto2g0838 588 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 85 574 - -
Sto2g0838 588 Gene3D - 361 525 IPR029057 -
Sto2g0838 588 SUPERFAMILY PRTase-like 337 548 IPR029057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g0838 Sto-Chr2 7289048 7290814 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g0838 89 575 PRT Gene Family AT2G16570 85.276 0.0 864
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g0838 K00764 - gmx:100791919 939.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto2g0838 2 7289048 7290814 Sto2g0838 2 7289048 7290814 ECH