Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g0805 ATGACAAACCCTCCAGAGGACCCTCCCTCGACCTCACGGTGCATCGCGCCGCTGATGCCTCCTTCCACCGCCGACGATATGCCACCGGACCGGAAAGATGACGCCGATGAGGCGGCGAGGCTTCCCCAGTGTGATGTAGCCGAAGAGAAGCCCCCCTCTCCAATTCCCGTGTCATCTGCTTCCAGGAAGGTAGAAGATGAGGCAAATGAGGACACTAATAGAGCTTCTGTGGAGACCAGGAAGGTAGAAGATGAGGCAAATGAGGCTTCCAGGTCAGATGAGAATGAAGAAACAGAGAAAATAGTATCAGGGGCAGAGACTGCAGACACATATATAGCTTGCAGCCTTGGTGAGAAAACTGAAGGAGCGGAGACCTGTAAGGTGGAAGAGGAAACCAATGGAGGTGAGATTTCTGTTGGAACCGGGAAGGTGGAAGGGGAAGCCAATGTAGGTGAGATTTCTGCGGGAACCTGGCAGGTGGAAGATGAAACCAGTTTAACTGACATTGCTATGGAGTCAAGTAAAGTGAAAGATGAAACCAATGTGGCTGACATTTCTGCGGAGACCAGGAAGGTGGAAGAGGAAACCAACCTAGCTGACATTGCTCAGGAGACCAGGAAGGTAGAAGAGGAGGTAGATGAAGCTGCCATGTCATATGAGAATGAGGAAGCAGAGAAAATAGTAGTGGGGACGGAAATATCAGAAACGAATATGGTTTGTACCCTTGGTGAGACAACTGAAATGGTGGAGACTCAGAAGGTGGAAGAGGAGGATGATGAGACAGCCATGTCGGATGAGAATGAAGAAGCAGAGAACAACGTGGTGGGGACTGAGACCACAGACACATATGTGGGTTGTACCCTCATTGAGACAACTAAAGCAGATGGAGTTGGCATGGGGGATGAAATCAGGGAGACTAACGAAAAGGAGGAAGCGGCAGAGGATTCCAATGTGGTTGGTATGGTGGAAGGTACAACTGACACAGAAGAGGAGCCAGATGGTGCTGGCATGGAGGAAGAGGCCGTAGAGGCAGAGGAGGTGGAGGCAGCAAATGAAGCTGATTTGATGGAAGAGGAAGTAGACGTTGCTGACATGACAGAAGATACTGAGGTGCTTGAGGTGGAAGAGGAGCAAAGTAGAAGTGTCAGTGGTGGAAAGAGAAAGCGTGGAAAGAATTCCAAGTCTACAGGCAGAGTTCCAGCTAGAAAAAAGATGGAAGAGGATGTTTGTTTCATTTGCTTTGATGGGGGTGAGCTTGTGCTTTGCGATCGCAGGGGATGCCCAAAGGCTTACCATCCTACATGTGTTAATCGTGATGACGCATTCTTTCGAGCAAAGGGTAAATGGAATTGCgGTTGGCATCTTTGCAGCAACTGCGAGAAGAATGCTTTATACATGTGCTACACCTGTACATTCTCCTTGTGCAAGGGATGCATCAAAGATGCTGTCATCTTATGTGTCAGGGGAAAGAAAGGCTTTTGTGAGACATGCATGAGGACTGTAATGTTAATTGAACAGAATGAGCTGGGAAACAAGGACACGGGGCAAGTGGATTTTGATGACAAAAACAGCTGGGAGTATCTCTTCAAGGACTACTACATAGATCTAAAAGAAAAGCTATCTTTAACTTATGATGAGCTCACTCAAGCTAAAAACCCATGGAAGGGATCTGATTTGCAGCCTTCCAAACAAGAATCACCTGATGAACTGTATGATGCTAATAATGATAGAGGATCACATTCAGATAGCTCTTTTGAGAATGTAGAGATGAGTAGTGTCAAGAGAAGAAAGGCCAAGAAGCGGTTGAAATCCCGTAGCAAAGAAGGGAATTCACATAGTGCAATGACATTTAGTGGTGCCAAAAGGCCATCTTCAGATGACAGATCTGAGTGGGCATCAAAAGAGCTTTTGGAGTTTGTTATGCACATGCGAAATGGTGACAACTCTGTTCTTTCTCAGTTTGATGTGCAGGCTCTTTTGTtagaatatattaaaagaaacaaGCTTCGAGATCCTCGCCGTAAAAGTCAAATAATTTGTGATGCAAGGCttcaaaatttgtttggtaAACCAAGAGTGGGACATTTTGAAATGTTAAAGCTTCTTGAATCCCATTTTCTTCTAAAAGAAGATTCCCAGGCTGAAGATCAGCAGGGGAGTGTTGTTGATACTGAACTTAATCATATGGAAGGTGATGGCAATACTGATTCCTATGTGAAGGCTGGGAAAGATAAGAAACGAAAAACGCGTAAAAAGGGTGATGAGAGAGGGCTTCAATCTAACCCTGATGAGTATGCTGCTATTGATAATCATAATATTAACTTAATTTATCTAAGACGTAATTTGGTGGAAGATCTACTTGAAGATACAGATAAGTTTCAGGATAAAGTAGTTGGGTCTTTTGTGAGAATAAGGATCTCTGGTAGTGGTCAGAAGCAAGACTTGTATAGGCTGGTTCAGGTTGTAGGTACTTGCAAAGCAGCTGAGCCATATAAAGTTGGTAAAAGGATGACAGATACCTTactagaaatattaaatttaaacaagACAGAGATTGTATCAATTGACATTATCTCAAATCAAGAGTTTACTGAGGATGAATGCAAGCGTCTTCGGCAGAGCATAAAGTGTGGGCTGATTAATCGGCTGACTGTGGGTGACATTTACGACAAGGCAATGATGCTGCAAGCAGTCAGAGTAAAAGATTGGCTAGAAACAGAGATAGTGAGGCTAAGTCATCTCCGTGATAGAGCAAGTATGGCATTAGCTGGTTGTGGAGACAGAAATATGCGGATTTTTGAGTTAGAATGTGTGGAGAAATTGCAGCTTTTGAAAACACCCGAGGAGCGCCAACGTAGATTAGAAGAAATTCCAGAAATACATGCTGACCCAAACATGGATCCAAGTTATGTatctgaagaagatgaagatgaaatgGATCATAAAAGACTAGAAAACTACATGAGACCTAGAGGATCTGCGTTTGATCGAAGGGGAAGAGAAATAGCTTCTCCTAGAACTGGTGGTTCTTCAAATGATTCATGGAGTGGAACTAGGAACTATCCTAATCGTGAACTAAGCAGGAATTTGTCTAATAAGGGATTCTCATTTAAAGCTGATGATGTTTCTAATGCTACTGAGGTATTGAATGATGCTCAAATGCTCCTGGGAAGAGATAGGGAAACGCAACTATCTAGCAGATGGGATGGGCAAAAACTATATTCGAGCTTAGAAAGTGGTGTTAAAAATATCCAACCTGTGGTAGCTTCTGAATCATTTTCTACTATTGTTTCAGATGCTTCTACAGTACCATCTTCTACTGGCATAGCACCTCCAGCTGTGAAAATTAATGAAACAGAAAAGATGTGGCATTATAAGGATCCATCTGGAAAAATTCAGGGACCATTTTCCATGGTGCAGTTACGTAAATGGAGTAACACTGGATATTTTCCTGCTGATTTGAGAACTTGGAAAACCACTGAGACAGAAGATGAGTCTATACTCGTAACAGACGCCCTAGCTGGTAACTTTTCTAAGCAGCCACCAATGATGGATAAAACTTCACCAAAGGTTCAAGTTGTGCATAATTTGCATCACTCATCCTCACCGTCTGGAAACCTTAACTTATCTGCTCAACGTACAGAAGGTCAAGTTGGGGGAAGATCAACATTTGACCAAAGTAAGTCCTATAATTCACGTAGTACTCTGGGTTCTCTAGGCCAAACTTCTGGAGGAAGTTGGAGGTCTGAAGATAACAATTCTATAATGAGTAGGCCTTCTCCGATGACAGTTGAGGTCCCCAAGATTCCTGCTCAGACTAGTTCTTCGGGTGCTGGTGTTAGAATTGAATCAACAAATCTTCCTTCACCTACTCCTCAGACTACCTCTTATGGGACTAAGGGGCAGGCTTTTGAAAGTAGATGGTCACCAACTCCTGCCCAGTCAGCTGGCTCTCTCGTGGGAAGTCCTTTTCAAGGAGGTCATGGAAGTTTGCAGGCTCCTGTACTCCCGGAGAATATGGTGCATAATGCTGAAAGTGGTGCAAGTTCACAACCTGGTATGATTTCAGTTCATAAGCCAGAGAAAGGTCTGCTTTTGAGCTCGACAGGTATTCCTCTAGGACATCCTCAGGCAACAACGGCACCTATTCTGGTTGACAGTAAAAGTGCAAGTATGCCAAGCATGGCCATGAGTGGCCATAATTCCCATGCTGAAGGTCAAGGGTGGGGATCTGGTTTGGTTCGGAAACCTGAAATGGCTGGCTCAATTCCGTTACGAGCGGGTGAACAGCAGCAGGCCTGGGGAGGCGTTCCTTCAAGGGTAGAATCAAATAATCTTGCGACTATGCCTGCTCAACCGCCTAGCCATGGCCACTGGGGTGATGCTTCATCAGTCCAGAATTCTGCCTCATTCAACACTGGAAATACAATGGGAAATTTCCCCATGCAAGGCATTCAAGACTTGAGGCCAACTTCAAGTAATCAACCCAACATCATAGCTCCTCAGCCACCCAATAATATGCCTTGGGGGGTAATGCCAGGAAATCCTAATGTAAGTTGGGGTGGTTCTTTACCGGCCAATATGAACATGAACTGGATGCCTGGGCAGGCGCCCGCACCAGGAAATGCAAATCCAGGATGGGCTGCTCCTGGTCAGGGGCCATCTCCTGTAAATGCAGCCGGTTGGGTTCCACCTGGTCAGCCCCATCCCAATGCTAATGCAGGTTGGGTTGTGCCTGGACCTGGCCAAGGGATGGCACCTGGAAGTGCTAATCCTGGTTGGGCTGCACCAGCTGGTAATCAAGGCATGTGGGGAAATGAACAAAGTCATAATGCAGACAGGTTTCCGAACCACAGGGATCGTGGTCCTCATGGTGGGGATTCTGGTTATGGAGGAGACAAACCATGGAATAGACAGTCTTCATTTAGCAGCGGAGGCCGAGGAGGTTCTTCGGGGCCTCCTTTCGGGGCACAGAGAGGAGTGTGCAAATACCAGAGGAGTGGTCACTGCAAGAAGGGAGCATTATGTGATTATCTGCACACCTGA 5046 0.4491 MTNPPEDPPSTSRCIAPLMPPSTADDMPPDRKDDADEAARLPQCDVAEEKPPSPIPVSSASRKVEDEANEDTNRASVETRKVEDEANEASRSDENEETEKIVSGAETADTYIACSLGEKTEGAETCKVEEETNGGEISVGTGKVEGEANVGEISAGTWQVEDETSLTDIAMESSKVKDETNVADISAETRKVEEETNLADIAQETRKVEEEVDEAAMSYENEEAEKIVVGTEISETNMVCTLGETTEMVETQKVEEEDDETAMSDENEEAENNVVGTETTDTYVGCTLIETTKADGVGMGDEIRETNEKEEAAEDSNVVGMVEGTTDTEEEPDGAGMEEEAVEAEEVEAANEADLMEEEVDVADMTEDTEVLEVEEEQSRSVSGGKRKRGKNSKSTGRVPARKKMEEDVCFICFDGGELVLCDRRGCPKAYHPTCVNRDDAFFRAKGKWNCGWHLCSNCEKNALYMCYTCTFSLCKGCIKDAVILCVRGKKGFCETCMRTVMLIEQNELGNKDTGQVDFDDKNSWEYLFKDYYIDLKEKLSLTYDELTQAKNPWKGSDLQPSKQESPDELYDANNDRGSHSDSSFENVEMSSVKRRKAKKRLKSRSKEGNSHSAMTFSGAKRPSSDDRSEWASKELLEFVMHMRNGDNSVLSQFDVQALLLEYIKRNKLRDPRRKSQIICDARLQNLFGKPRVGHFEMLKLLESHFLLKEDSQAEDQQGSVVDTELNHMEGDGNTDSYVKAGKDKKRKTRKKGDERGLQSNPDEYAAIDNHNINLIYLRRNLVEDLLEDTDKFQDKVVGSFVRIRISGSGQKQDLYRLVQVVGTCKAAEPYKVGKRMTDTLLEILNLNKTEIVSIDIISNQEFTEDECKRLRQSIKCGLINRLTVGDIYDKAMMLQAVRVKDWLETEIVRLSHLRDRASMALAGCGDRNMRIFELECVEKLQLLKTPEERQRRLEEIPEIHADPNMDPSYVSEEDEDEMDHKRLENYMRPRGSAFDRRGREIASPRTGGSSNDSWSGTRNYPNRELSRNLSNKGFSFKADDVSNATEVLNDAQMLLGRDRETQLSSRWDGQKLYSSLESGVKNIQPVVASESFSTIVSDASTVPSSTGIAPPAVKINETEKMWHYKDPSGKIQGPFSMVQLRKWSNTGYFPADLRTWKTTETEDESILVTDALAGNFSKQPPMMDKTSPKVQVVHNLHHSSSPSGNLNLSAQRTEGQVGGRSTFDQSKSYNSRSTLGSLGQTSGGSWRSEDNNSIMSRPSPMTVEVPKIPAQTSSSGAGVRIESTNLPSPTPQTTSYGTKGQAFESRWSPTPAQSAGSLVGSPFQGGHGSLQAPVLPENMVHNAESGASSQPGMISVHKPEKGLLLSSTGIPLGHPQATTAPILVDSKSASMPSMAMSGHNSHAEGQGWGSGLVRKPEMAGSIPLRAGEQQQAWGGVPSRVESNNLATMPAQPPSHGHWGDASSVQNSASFNTGNTMGNFPMQGIQDLRPTSSNQPNIIAPQPPNNMPWGVMPGNPNVSWGGSLPANMNMNWMPGQAPAPGNANPGWAAPGQGPSPVNAAGWVPPGQPHPNANAGWVVPGPGQGMAPGSANPGWAAPAGNQGMWGNEQSHNADRFPNHRDRGPHGGDSGYGGDKPWNRQSSFSSGGRGGSSGPPFGAQRGVCKYQRSGHCKKGALCDYLHT 1681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g0805 1681 MobiDBLite consensus disorder prediction 553 568 - -
Sto2g0805 1681 MobiDBLite consensus disorder prediction 63 103 - -
Sto2g0805 1681 SUPERFAMILY SWIB/MDM2 domain 630 707 IPR036885 -
Sto2g0805 1681 MobiDBLite consensus disorder prediction 1581 1654 - -
Sto2g0805 1681 MobiDBLite consensus disorder prediction 252 267 - -
Sto2g0805 1681 SUPERFAMILY Plus3-like 768 897 IPR036128 GO:0003677
Sto2g0805 1681 ProSiteProfiles Zinc finger C3H1-type profile. 1656 1681 IPR000571 GO:0046872
Sto2g0805 1681 MobiDBLite consensus disorder prediction 306 356 - -
Sto2g0805 1681 SMART swib_2 633 711 IPR019835 -
Sto2g0805 1681 MobiDBLite consensus disorder prediction 1005 1027 - -
Sto2g0805 1681 ProSiteProfiles GYF domain profile. 1120 1174 IPR003169 GO:0005515
Sto2g0805 1681 MobiDBLite consensus disorder prediction 1634 1648 - -
Sto2g0805 1681 Pfam SWIB/MDM2 domain 633 706 IPR003121 -
Sto2g0805 1681 MobiDBLite consensus disorder prediction 370 400 - -
Sto2g0805 1681 Pfam Plus-3 domain 772 875 IPR004343 GO:0003677
Sto2g0805 1681 MobiDBLite consensus disorder prediction 252 275 - -
Sto2g0805 1681 MobiDBLite consensus disorder prediction 1198 1322 - -
Sto2g0805 1681 Coils Coil 339 359 - -
Sto2g0805 1681 MobiDBLite consensus disorder prediction 1 15 - -
Sto2g0805 1681 SMART rtf1 767 877 IPR004343 GO:0003677
Sto2g0805 1681 CDD SWIB-MDM2_like 631 706 - -
Sto2g0805 1681 MobiDBLite consensus disorder prediction 994 1027 - -
Sto2g0805 1681 Gene3D - 1121 1180 IPR035445 -
Sto2g0805 1681 SMART gyf_5 1121 1176 IPR003169 GO:0005515
Sto2g0805 1681 MobiDBLite consensus disorder prediction 326 356 - -
Sto2g0805 1681 MobiDBLite consensus disorder prediction 553 628 - -
Sto2g0805 1681 MobiDBLite consensus disorder prediction 121 144 - -
Sto2g0805 1681 Coils Coil 253 273 - -
Sto2g0805 1681 MobiDBLite consensus disorder prediction 713 762 - -
Sto2g0805 1681 CDD Bbox1 455 481 - -
Sto2g0805 1681 SMART PHD_3 409 455 IPR001965 -
Sto2g0805 1681 MobiDBLite consensus disorder prediction 1267 1321 - -
Sto2g0805 1681 ProSitePatterns Zinc finger PHD-type signature. 410 470 IPR019786 -
Sto2g0805 1681 PANTHER UNCHARACTERIZED 167 1681 - -
Sto2g0805 1681 MobiDBLite consensus disorder prediction 1612 1627 - -
Sto2g0805 1681 ProSiteProfiles Zinc finger PHD-type profile. 407 473 IPR019787 -
Sto2g0805 1681 SUPERFAMILY FYVE/PHD zinc finger 406 459 IPR011011 -
Sto2g0805 1681 Coils Coil 191 225 - -
Sto2g0805 1681 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 19 167 1681 - -
Sto2g0805 1681 MobiDBLite consensus disorder prediction 1 104 - -
Sto2g0805 1681 CDD PHD5_NSD 409 454 - -
Sto2g0805 1681 MobiDBLite consensus disorder prediction 26 44 - -
Sto2g0805 1681 SUPERFAMILY GYF domain 1111 1173 IPR035445 -
Sto2g0805 1681 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 397 501 IPR013083 -
Sto2g0805 1681 CDD GYF 1120 1175 IPR003169 GO:0005515
Sto2g0805 1681 Gene3D SWIB/MDM2 domain 618 716 IPR036885 -
Sto2g0805 1681 MobiDBLite consensus disorder prediction 1198 1260 - -
Sto2g0805 1681 ProSiteProfiles Plus3 domain profile. 767 900 IPR004343 GO:0003677
Sto2g0805 1681 ProSiteProfiles SWIB/MDM2 domain profile. 625 708 IPR003121 -
Sto2g0805 1681 Gene3D - 769 897 IPR036128 GO:0003677
Sto2g0805 1681 Pfam GYF domain 1123 1166 IPR003169 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g0805 Sto-Chr2 6953233 6963363 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g0805 407 494 PHD Transcription Factor Family AT5G36670 32.000 1.35e-06 51.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SWI/SNF-BAF60b Sto2g0805 Plus-3 2.3e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g0805 - - gmx:121174757 1802.72