Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g0783 ATGGCTTCCGATTCTTCTCCAACGAATTTCAACAACGGTCCTTCCTCACCCGAAGATTCCTTTTCCAGTCCAATTGGCAACACGTTATCGTCCCCCGGTGATggaactcgccggagaaggCGTGGACGTTCTTCTACGCCGTCGGCGTTTGCAACTCCTCCGTCTAATCGGTCTCGATTCGCCTCCTCCGATGGGACCCCAACTCCAACGCGATCCAGgcaaagaggaggaggaggaggagggcgGAGAGCGTCCGTGTCTTCTACCCCCGTTGCGGCCACTCCCACCTCCACCGATGACGCGCCAATGTCTTCCGAGGGCGGCGAGGGGTACAATGGAGATGACGTTAGGCCTACCTTCGTGTGGGGTACTAATATAAGCGTGGAAGATGTAAATGAGGCGATTCAGCGGTTTCTGAAGCACTTCAGAGAGCAGTCATCTCAGAGTGATGGATTGCATGTGGAGGGGAAATATGAGAGGGCTATTAAACAGGTCATTGAGATTGAGGGAGATTCACTAGACGTCGATGCTCACGACGTGTTTGATTATGATCCGGACTTGTACACTAAGATGGTGAGATTCCCGCTTGAGGTCCTTGCAATTTTTGATTTGGTTTTGATGAATATGGTTAGTCGAATCAACCCGTTGTTCGAGAAGCACATTCAAACTCGAATTTTCAATCTCAAAACCTCAACTTCGATGAGAAATTTGAATCCATCTGATATTGAGAGGATAGTATCAATGAAGGGAATGATTATAAGATGTAGCGCAATCATACCAGAAATAAGGGAAGCTATATTTAGATGTCTTGTGTGCGGATACTGCTCTGACCCGGTTGCTGTAGAGAGAGGACGAATAACTGAACCTACTGTATGCTTGAGGGAAGAATGTCAAGCCAAAAACTCCATGACTCTGGTTCACAACCGATGCAGGTTTGCAGACAAGCAAATTGTGAGGCTCCAGGAGACACCTGATGAGATACCTGAAGGGGGAACACCACACACAGTGAGCTTGCTGATGCATGACAAGCTGGTGGATGCTGGAAAGCCAGGTGACAGAGTTGAGGTGACTGGTATATATAGGGCAATGAGTGTCAGGGTTGGACCTACTCAAAGGACTGTTAAATCATTGTTCAAGACTTATGTCGATTGTCTTCACATAAAGAAGACTGATAAGTCAAGGATGCTAGCAGAGGATGCTATGGATGTCGATAATAGCCAGGGCAGAATTGCAGAAGAAATTCATTTTGATGAAGAAAAGGTGGCACAGCTAAAAGAGCTCTCAAAAAAGCCAGATATATATGAAAGGCTAACAAAATCGTTGGCTCCTAACATCTGGGAGCTGGATGATGTGAAGAAAGGTCTTCTTTGCCAGCTTTTTGGTGGCAATGCTTTGCAGATGGCATCTGGTGCTAGCTTCCGTggtgatattaatattttacttgTTGGTGATCCTGGAACTAGTAAGTCCCAgctactccaatacatacataAACTATCTCCACGTGGTATTTACACCAGTGGAAGGGGGAGCTCTGCTGTTGGGCTGACTGCTTATGTAACCAAAGATCCTGAAACAGGCGAAACTGTTCTAGAGAGTGGTGCCCTAGTTTTAAGTGACAGAGGCATATGCTGTATtgatgaatttgacaaaatgtCTGACAATGCCAGGAGCATGTTACATGAGGTGATGGAACAACAAACTGTTTCAATAGCAAAGGCAGGTATTATTGCCTCTCTTAATGCCAGGACTTCAGTGTTGGCTTGTGCAAATCCAAGCGGGTCGCGGTATAATCCTCGCTTGTCTGTCATTGACAACATACACCTTCCTCCTACACTTCTGTCCAGGTTTGATTTGATCTACTTAATTCTTGACAAGGCTGATGAACAGACAGATAGACGACTTGCCAAGCATATTGTTTCCTTACACTTTGAGAATCCTGAGAGCATGgagcaggatgctttggacctTTCCACACTAACTGCTTATGTAAGCTATGCCCGGAAGAATATACACCCACAATTATCTGATGAAGCTGCAGAAGAATTGACTAGAGGTTATGTAGAAATGAGAAGAAGAGGAAATTTTCCTGGGAGTAGCAAAAAGGTGATAACAGCAACACCAAGGCAGATTGAGAGTTTGATACGGCTTAGTGAAGCCCTGGCTCGGATTCGCTTCTCAGAATTGGTTGAAAAGCGTGACGTAATGGAGGCATTTCGGCTTCTGGAAGTTGCAATGCAGCAGTCTGCAACTGATCACTCTACTGGAACCATTGACATGGATCTTATTACTACTGGAGTTTCGGCAAGCGAAAGGATGAGACGAGAGAGTCTGCTTCAAGCAACTCGCAACATAATCATGGAGAAGTTGCAAATTGGGGGGCCATCAATGCGACTATTGGAGTTACTGGAAGAGTTGAAGAAACAGAACACTGGCGAAATCCACCTTCCTGATCTAAGGAATGCAGTTGCTAGTCTGGCCAGCGAAGGATTTGTTACTATGCATGGTGACAATGTAAAAAGATCATGA 2529 0.4338 MASDSSPTNFNNGPSSPEDSFSSPIGNTLSSPGDGTRRRRRGRSSTPSAFATPPSNRSRFASSDGTPTPTRSRQRGGGGGGRRASVSSTPVAATPTSTDDAPMSSEGGEGYNGDDVRPTFVWGTNISVEDVNEAIQRFLKHFREQSSQSDGLHVEGKYERAIKQVIEIEGDSLDVDAHDVFDYDPDLYTKMVRFPLEVLAIFDLVLMNMVSRINPLFEKHIQTRIFNLKTSTSMRNLNPSDIERIVSMKGMIIRCSAIIPEIREAIFRCLVCGYCSDPVAVERGRITEPTVCLREECQAKNSMTLVHNRCRFADKQIVRLQETPDEIPEGGTPHTVSLLMHDKLVDAGKPGDRVEVTGIYRAMSVRVGPTQRTVKSLFKTYVDCLHIKKTDKSRMLAEDAMDVDNSQGRIAEEIHFDEEKVAQLKELSKKPDIYERLTKSLAPNIWELDDVKKGLLCQLFGGNALQMASGASFRGDINILLVGDPGTSKSQLLQYIHKLSPRGIYTSGRGSSAVGLTAYVTKDPETGETVLESGALVLSDRGICCIDEFDKMSDNARSMLHEVMEQQTVSIAKAGIIASLNARTSVLACANPSGSRYNPRLSVIDNIHLPPTLLSRFDLIYLILDKADEQTDRRLAKHIVSLHFENPESMEQDALDLSTLTAYVSYARKNIHPQLSDEAAEELTRGYVEMRRRGNFPGSSKKVITATPRQIESLIRLSEALARIRFSELVEKRDVMEAFRLLEVAMQQSATDHSTGTIDMDLITTGVSASERMRRESLLQATRNIIMEKLQIGGPSMRLLELLEELKKQNTGEIHLPDLRNAVASLASEGFVTMHGDNVKRS 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g0783 842 SMART AAA_5 475 625 IPR003593 -
Sto2g0783 842 MobiDBLite consensus disorder prediction 1 116 - -
Sto2g0783 842 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 444 759 IPR027417 -
Sto2g0783 842 ProSitePatterns MCM family signature. 542 550 IPR018525 GO:0003677|GO:0005524|GO:0006260
Sto2g0783 842 SMART mcm 230 747 IPR031327 GO:0003677|GO:0005524|GO:0032508
Sto2g0783 842 Pfam MCM N-terminal domain 133 230 IPR027925 -
Sto2g0783 842 Gene3D - 261 313 - -
Sto2g0783 842 MobiDBLite consensus disorder prediction 87 103 - -
Sto2g0783 842 Pfam MCM OB domain 234 363 IPR033762 -
Sto2g0783 842 Gene3D - 411 751 IPR027417 -
Sto2g0783 842 PRINTS Mini-chromosome maintenance (MCM) protein 4 signature 256 269 IPR008047 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Sto2g0783 842 PRINTS Mini-chromosome maintenance (MCM) protein 4 signature 307 319 IPR008047 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Sto2g0783 842 PRINTS Mini-chromosome maintenance (MCM) protein 4 signature 449 460 IPR008047 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Sto2g0783 842 PRINTS Mini-chromosome maintenance (MCM) protein 4 signature 595 612 IPR008047 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Sto2g0783 842 PRINTS Mini-chromosome maintenance (MCM) protein 4 signature 747 756 IPR008047 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Sto2g0783 842 MobiDBLite consensus disorder prediction 1 33 - -
Sto2g0783 842 SUPERFAMILY Nucleic acid-binding proteins 153 384 IPR012340 -
Sto2g0783 842 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 87 841 IPR031327 GO:0003677|GO:0005524|GO:0032508
Sto2g0783 842 CDD MCM4 436 745 - -
Sto2g0783 842 Gene3D - 125 228 - -
Sto2g0783 842 ProSiteProfiles MCM family domain profile. 433 639 IPR001208 GO:0003677|GO:0005524|GO:0032508
Sto2g0783 842 Pfam MCM P-loop domain 421 643 IPR001208 GO:0003677|GO:0005524|GO:0032508
Sto2g0783 842 Gene3D - 234 373 IPR012340 -
Sto2g0783 842 Gene3D - 752 839 IPR036388 -
Sto2g0783 842 Pfam MCM AAA-lid domain 659 745 IPR041562 -
Sto2g0783 842 PRINTS Mini-chromosome maintenance (MCM) protein family signature 474 489 IPR001208 GO:0003677|GO:0005524|GO:0032508
Sto2g0783 842 PRINTS Mini-chromosome maintenance (MCM) protein family signature 534 548 IPR001208 GO:0003677|GO:0005524|GO:0032508
Sto2g0783 842 PRINTS Mini-chromosome maintenance (MCM) protein family signature 562 575 IPR001208 GO:0003677|GO:0005524|GO:0032508
Sto2g0783 842 PRINTS Mini-chromosome maintenance (MCM) protein family signature 586 598 IPR001208 GO:0003677|GO:0005524|GO:0032508
Sto2g0783 842 PRINTS Mini-chromosome maintenance (MCM) protein family signature 613 621 IPR001208 GO:0003677|GO:0005524|GO:0032508
Sto2g0783 842 PANTHER DNA REPLICATION LICENSING FACTOR MCM4 87 841 IPR008047 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Sto2g0783 842 MobiDBLite consensus disorder prediction 45 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g0783 Sto-Chr2 6689628 6695391 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g0783 1 841 Core DNA Replication Machinery Family AT2G16440 76.387 0.0 1304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g0783 K02212 - qsu:112027052 1393.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto2g0783 2 6689628 6695391 Sto2g0783 2 6689628 6695391 ECH