Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g0767 TTGCCTAATTCGTATCCTGAGACATCGATTACTCCTAGTAATATAACATTGTATATGAACTCAGGTTCATATGCAGAGGCATTCTCTGGCAATTCTCATGAGCAGAATAACTGCTTTGTGATCCCCTCAATAAATTCTTCACATGCGACTTCTGAACAGCAAGAAATCTTAGCAAATCTTGGGGGGTTGCAAGCTGGAGACCACAATTTCACTGCATGGAGAGAGGGTAGGAATGAGATGATGGTCACACATCCACTGGATGGACAGAATGTGCAGGGTCAGGGATTATCTCTTAGCCTCGGAACCCAAATACCATCCGGAATCCAAATGCCTCCTTTCCACGATCGAAGTTCTAATCtgagttttgattcatttttaGGTCGAAATCCATCGATTTCAGGCCATAGAAGTGGCTCACCTAGGCATGAATCGTTGAGGCAGTCTGATATTTTACCGCCTGATTTGCCTGAAGGTAATCAGGATTTGAATAGAGGGGATTATTCATTGCATGGAATACCGAGCAATATTGCTAGAACCAGTCCTAATTCCAAATATCTCCAGGCAGCACAACAGCTACTTGATGAAGTTGTTGACATCCAAAGCGCTGCAAAGCGATTGAATGTGAAAAGTCATAGCACACATGAAAATTCTAAGAAGACTTCCAAGGAGGATGATGAGAGACTAGAAAATGAAAGGGCACCTGCAAATGGAGAGCTTAACACTCAAGATTCTGTTAGTAACTCCTCTTGTGAGCTTTCACATGCTGAAAAACAAGATCTGCAGAACAAGTTAACTAAGCTTCTCTCAATGCTGGATGAGGTTGATAGTAGGTACAAACAATACTATCATCAGATGCAGATTGTAGTATCATCATTTGATGTCATAGCTGGACGCGGGGCAGCTAAGCCATACACCGCACTTGCTCTCCAAACCATTTCGCGCCATTTCCGGTGCTTGCGTGATGCAATCACTGGCCAGATCAGCGTGACACAGAAGAGCCTTGGAGAGCAAGATGCTTCAGGAAATCATAAAGGAGTTGGAATATCAAGACTCCGGTATGTAGACCAACAAATCCGGCAACAGAGAGCTATCCAGCAGCTTGGTGTGATGCAGCATGCATGGAGGCCACAAAGGGGACTGCCAGAAAGCTCTGTTTCAATTCTTCGAGCTTGGCTCTTCGAGCATTTCCTTCATCcCTATCCTAAAGATTCTGATAAGATCATGCTGGCAAGGCAGACAGGCTTGACCAGAAGTCAGGTCTCAAATTGGTTTATAAATGCACGGGTGCGTCTATGGAAACCtatgattgaagagatgtacaAGGAAGAAACTGGCGATGCTGAGATGGAGTCCAGTTCTTCATCTGAAAATGCATCCAAGGCTACAAAAAGTGATGTCAAGACCTCTGATGATAGATGTGATGATTTGCAGCAGAGCCAAGGCTCAATAGCCAACAAGAATTCCTATGCCGCCGCCGCTGGACTTTCTAATGACTTGAGATCTGACAATGTTCTTGATACAGAAATAATGGGATCTGCCGGATTGGCTAGTCTTCACCACGGAGGTCACGTGGATGACACCGAATACGGGAATGGGACGACGGATTGTAGTCCCTTTCCAGATGACACGGTTCAATCCGACGGAGGCACTGCCGGTGGTTTCATGGCCGTTACTACTCCAACATGCCAAATGTCAGAGTTGGGGAGGTTTGAGACTGGAAATGGAGTATCACTGACATTAGGATTGCAGCATCGTGAGGGTGGTGGTGATTTTATGTCTGGTGAGACTCATCATCATAGTTTTGTTGTTATGAGGGGGGAGGATGGGATTTACAATACTGCTGCTTCAGCTCCAACAATTGTTGGAGCTGAGACTTCAGAACTAGAGTGTGTGGGTACTGGAGACCAGCAGAGAAGGTATAGTTCAACCCATTTATTACATGATTTTGTAGTATAA 1956 0.4417 LPNSYPETSITPSNITLYMNSGSYAEAFSGNSHEQNNCFVIPSINSSHATSEQQEILANLGGLQAGDHNFTAWREGRNEMMVTHPLDGQNVQGQGLSLSLGTQIPSGIQMPPFHDRSSNLSFDSFLGRNPSISGHRSGSPRHESLRQSDILPPDLPEGNQDLNRGDYSLHGIPSNIARTSPNSKYLQAAQQLLDEVVDIQSAAKRLNVKSHSTHENSKKTSKEDDERLENERAPANGELNTQDSVSNSSCELSHAEKQDLQNKLTKLLSMLDEVDSRYKQYYHQMQIVVSSFDVIAGRGAAKPYTALALQTISRHFRCLRDAITGQISVTQKSLGEQDASGNHKGVGISRLRYVDQQIRQQRAIQQLGVMQHAWRPQRGLPESSVSILRAWLFEHFLHPYPKDSDKIMLARQTGLTRSQVSNWFINARVRLWKPMIEEMYKEETGDAEMESSSSSENASKATKSDVKTSDDRCDDLQQSQGSIANKNSYAAAAGLSNDLRSDNVLDTEIMGSAGLASLHHGGHVDDTEYGNGTTDCSPFPDDTVQSDGGTAGGFMAVTTPTCQMSELGRFETGNGVSLTLGLQHREGGGDFMSGETHHHSFVVMRGEDGIYNTAASAPTIVGAETSELECVGTGDQQRRYSSTHLLHDFVV 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g0767 651 MobiDBLite consensus disorder prediction 207 254 - -
Sto2g0767 651 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 54 598 - -
Sto2g0767 651 SMART HOX_1 374 438 IPR001356 GO:0003677
Sto2g0767 651 Pfam Associated with HOX 182 324 IPR006563 -
Sto2g0767 651 ProSiteProfiles 'Homeobox' domain profile. 371 434 IPR001356 GO:0003677
Sto2g0767 651 MobiDBLite consensus disorder prediction 208 233 - -
Sto2g0767 651 CDD homeodomain 374 435 IPR001356 GO:0003677
Sto2g0767 651 MobiDBLite consensus disorder prediction 235 254 - -
Sto2g0767 651 Gene3D - 370 448 - -
Sto2g0767 651 MobiDBLite consensus disorder prediction 113 138 - -
Sto2g0767 651 MobiDBLite consensus disorder prediction 113 168 - -
Sto2g0767 651 SMART prehox3 174 325 IPR006563 -
Sto2g0767 651 Coils Coil 257 277 - -
Sto2g0767 651 Coils Coil 189 209 - -
Sto2g0767 651 Pfam Homeobox KN domain 391 430 IPR008422 GO:0003677|GO:0006355
Sto2g0767 651 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 10 54 598 - -
Sto2g0767 651 MobiDBLite consensus disorder prediction 443 476 - -
Sto2g0767 651 SUPERFAMILY Homeodomain-like 375 441 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g0767 Sto-Chr2 6566166 6570133 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g0767 4 651 Homeobox Transcription Factor Family AT4G34610 42.492 3.13e-138 413
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Sto2g0767 POX 1.7e-49 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g0767 - - gmx:100801522 822.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto2g0767 2 6566166 6570133 Sto2g0767 2 6566166 6570133 ECH