Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g0718 ATGATGCACTGCGTGAACAATCCTTCCGCGGGGAATTGCTCCGATGACATGGCGGTGACGCAAAGGCAGAGGCTACGGATGACGTGGCAGCTACCACAGCAAGCGGAATTAGAAGACCATCGCGGCGGCTTCTACGACGGAATCGGGTTCGGGTTCGACGCCGGGGCGCACGACTCGGCTCTGGCCGAGGTGCTGGCCAAGTCCATGAAACCCGACCCGAATCCAACAAACGGGTGGGCCTCCGCAGCCGCGGCTTCTTCCACTTCCACACACTCTGTTTCGGTTTCTCCCACCACCTCTTCATCTCCAACCGCCAATCATGCCTTGAAGAAGAGAAAATCTCACAACCTTCTCAACTCTAAGgtaatacatacatacatacatacatacataaggGAGAATTCGAAGGCGTCGGAGGTTCAGAAACCCGACTACATTCATGTCCGGGCACGACGAGGCCAAGCCACTGACAGCCATAGCCTAGCCGAAAGAGTGAGAAGGGAAAAGATTAGTGAGAGAATGAAGTATTTGCAAGATTTAGTACCTGGATGCAACAAAATCACTGGAAAAGCTGGAATGCTTGATGAGATCATCAATTATGTTCAATCCCTTCAGCGACAAGTAGAGTTTTTGTCTATGAAATTGGCTGCGGTCAACCCTAGGCTCGACTTCAACCTCGACGATCTCTTTTCCAAACAGGTGTTTGGAGGATGTGGTCCAAGTTTTGGGACAATAGGAATGGGAACAGAGATGAACAACATAGCATCATGTGTTGAGTTGAACACAGCACAACAAATAGTTTCATGTTGTGGGCTAGACATGGGGTTATCCACTACTACCATCCCTACAGACATGGGCCTCAAGAGAACCATTAGTGCCCCGGTTTCGATCCCTGATACGTTTCTCGACACATATTTTACGCAAATTCTACCCTCTAGCTCCACTTGGGAATCTGATTTTCATAACCTTTCTTCCAATGTGAGTTTTGATCAAGCAAGAGCAGCATTAACCTCCATTCCTTCTCACTCATTCTCAGATCTAGTTGAAGCTAGCATTCCAAAGATGGAGATGTAA 1074 0.4739 MMHCVNNPSAGNCSDDMAVTQRQRLRMTWQLPQQAELEDHRGGFYDGIGFGFDAGAHDSALAEVLAKSMKPDPNPTNGWASAAAASSTSTHSVSVSPTTSSSPTANHALKKRKSHNLLNSKVIHTYIHTYIRENSKASEVQKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNLDDLFSKQVFGGCGPSFGTIGMGTEMNNIASCVELNTAQQIVSCCGLDMGLSTTTIPTDMGLKRTISAPVSIPDTFLDTYFTQILPSSSTWESDFHNLSSNVSFDQARAALTSIPSHSFSDLVEASIPKMEM 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g0718 357 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 154 204 IPR011598 GO:0046983
Sto2g0718 357 MobiDBLite consensus disorder prediction 90 107 - -
Sto2g0718 357 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 152 223 IPR036638 GO:0046983
Sto2g0718 357 Gene3D - 151 225 IPR036638 GO:0046983
Sto2g0718 357 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 122 333 IPR024097 GO:0006355
Sto2g0718 357 CDD bHLH_AtBPE_like 144 229 - -
Sto2g0718 357 PANTHER TRANSCRIPTION FACTOR BHLH63-LIKE 122 333 - -
Sto2g0718 357 SMART finulus 160 210 IPR011598 GO:0046983
Sto2g0718 357 MobiDBLite consensus disorder prediction 90 113 - -
Sto2g0718 357 Pfam Helix-loop-helix DNA-binding domain 158 205 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g0718 Sto-Chr2 6152672 6155302 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g0718 139 234 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G34530 85.417 1.61e-55 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Sto2g0718 HLH 1.9e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g0718 - - jre:109013802 302.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto2g0718 2 6152672 6155302 Sto2g0718 2 6152672 6155302 ECH
Sto2g0718 2 6152672 6155302 Sto6g3805 6 42686503 42687850 ECH