Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g0714 ATGGCGTCCGCAGAAATTGAATACCGATGCTTTGTTGGTGGGCTCGCATGGGCCACCGACAACGATGCTCTCGAGAAAGCCTTCTCCCCCTTCGGCGAGATCATCGAATCGAAGGTGATCAACGATCGTGAGACTGGAAGGTCGAGAGGTTTCGGATTCGTGACCTTCTCCTCTGAGCAGGCTTTGAAGGACGCGATCGAGGGAATGAACGGTCAGGATCTTGATGGCCGTAATATCACTGTGAACGAGGCTCAGTCCCGTGGTAGAGGCGGCGGCGGAGGCGGAGACAGCCGCGGTGGAGGAGGCGGATATGGTGGTGGATACGGTGGTGGAGGCCGCCGTGAAGGTGGATACAACCACCGTGGTTGCGTCGGTGGTGGTGATGGCGGCTCTCATCACACGAGGGGAGGCGGTGCTTCCGATGGAAACTGGAGGAGCTAG 441 0.5873 MASAEIEYRCFVGGLAWATDNDALEKAFSPFGEIIESKVINDRETGRSRGFGFVTFSSEQALKDAIEGMNGQDLDGRNITVNEAQSRGRGGGGGGDSRGGGGGYGGGYGGGGRREGGYNHRGCVGGGDGGSHHTRGGGASDGNWRS 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g0714 146 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 11 79 IPR000504 GO:0003723
Sto2g0714 146 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 8 86 IPR000504 GO:0003723
Sto2g0714 146 Gene3D - 2 144 IPR012677 -
Sto2g0714 146 PANTHER RNA-BINDING PROTEIN GRP1A, PUTATIVE, EXPRESSED-RELATED 1 145 - -
Sto2g0714 146 SMART rrm1_1 9 82 IPR000504 GO:0003723
Sto2g0714 146 SUPERFAMILY RNA-binding domain, RBD 9 116 IPR035979 GO:0003676
Sto2g0714 146 MobiDBLite consensus disorder prediction 68 146 - -
Sto2g0714 146 PANTHER GEO13361P1-RELATED 1 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g0714 Sto-Chr2 6106884 6107726 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g0714 11 89 Eukaryotic Initiation Factors Gene Family AT1G22760 39.024 1.80e-10 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g0714 - K13195 vvi:100853676 177.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto2g0714 2 6106884 6107726 Sto2g0714 2 6106884 6107726 ECH