Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g0710 ATGGGGGATCATCGCCGAAGGATAGTGTCTTTTGGGTTCTTGTTCTTGTTGCTTTTTCAGTTCACGTTTCAGCAGATTGAGCCTCTGAGTTCACCCATTGAGCGAGCAGCTTTACTTCAACTTCGATCCTCTTTGAGCTTGAGAAGCAGGGAATGGCCATTGAAGGCTGACCCTTGTTTAATCTGGAATGGTGTGAGCTGTGACGAGAATGGTAGAGTCATTGGGATCAATGTTTCTGGGTTTAGAAGAACTCGAAGAGGGAACCAAAACCCACAATTCTCTATTGATGCTTTAGCCAATTTCACCCTCTTGCAATCCTTCAACGCCTCCAAGTTTTCGCTTCCTGGTCCTATTCCTCACTGGTTTGGCCGCAAGCTTTCTTCACTCAGAGTGCTTGATCTTCGTTCTTGTTCCATCAATGGTGGAATTCCTTCCAGTATTGGGAATCTAACTAGCCTAACTGGTCTGTATTTATCTGATAATAACCTCACTGGGATGATTCCTAGTAGTATAAGTCAACTCTTAGGCCTTTCTGTTCTTGATCTTTCCCAGAATTCTCTTACTGGACCcttaccatcatcatcatcctttGCCTTTCTTGGGAATCTTTCTTTCCTTGACCTTTCGTCCAACTATTTATCAGGGTCGATTCCTCACGGCATTGGGGCACTTTCAAAGTTACAATACTTGAATCTTTCTTACAATTCTCTAACTTCATCTATACCTACTCAGCTTGGGGCTCTCAGTAGCTTGGTTGACCTTGATCTAAGTGGGAATTCCTTGTCTGGTTTTGTACCTCCGAATTTAATGGGGTTGAGGACCTTGCAGAGAATGATGCTTGGGAACAACATTCTTGAAGGGCATTTACCGGGTAACTTTCCTGCTTGGTCACAATTGCGGTTTGTAGTGCTGAGACAAAATAACTTTTCTGGTGCTTTGCCTGATAAGTTGTGGTCTTTACCGAGATTGAGCTTTCTGGATGTCTCTGGGAATAACTTCACTGGTGTGCTTCCTAATTCTAGTTCTACTGTTAATGCTAATACTGCTTTGGAGCTCAACATTTCTCATAATCTTTTCTATGGAGGCATCACTCCTCTGCTTGAAAGGTTCAGTTTCATTGATATGTCAAGCAATTATCTCAAGGGCAAGGTTGATTTCGTGCTTAATGCATCTTTAGATAGCAATTGCCTCCAAaatgtgtcaaatcagaggacAAGAGTAGAATGTGTATCCTTCTATTCTGAGAGGGGCCTTGCTTTCGATGATTTTGGGCGCGTGAATTTGACAAGACCTCCTGCTGAAGAAAGCTCAGGGAAGAGCAATGGAAGAAAGTTTATATTAGCAGTAGGGTTGGGTGTAGGTGGTTTGATTTCACTTTTGATGTTGTTACTGGTATGGTTGCTTTGGCGTAATCGTAAGAGggttaattcaaataaaaagggGGTCACAGTGGGCAATGTTGTCACTAGAGGTGGTCCTCCACCTCCTGATGTATCGATAAATTTTGCGAAAGTGGGAGACTCATTTACATATCAGCAGCTGCTCAAGGCCGCAGGTGATTTCAGTGATGCAAATCTTATCAAACGTGGTCACACAGGTGATCTCTTCAATGGTGTTTTGGAAAGTGGGATCCCAGTAGTCATAAAAAGGGTTGACATGCGTTCAACTAAAAATGAGAATGCTTACATTTCGGAATTGGACTTCTTCAGTAAGGTTTCTCATCCAAGAATGGTTCCCCTGTTGGGTCATTGcttagagaatgagaatgagaagttCCTGGTTTATAAACATATGCCAAACGGGGACTTGTTGAATTGTTTGAATGACCGAAGAACTATATCCGAAGATGGTACGGTGCAGTCATTGGATTGGATAACAAGGTTGAAAATTGCTACTGGAACAGCAGAGGCCCTATCTTATCTGCATCATGAATGCTATCCTCCCCTCGTTCACAGAGATATTCAAGCAAGCAGTATACTTCTAGATGATAAATATGAAGTTCGGTTAGGGAGTCTAAGTGAAGCCTGTACTCAAGAAGGGGATACTCATCAAAGCAGAATCACTAGGTTGCTACGGTTACAGCAGTCCTCTGATCAGGGCACATCTGgtccatcatcatcatctgttTGTGCCTCTGATGTCTATTGCTTTGGGAAAGTATTGCTTGAGATGATCACAGGTAAACTGGGAATCAGTGCATCTGGTGATGCAGAAGTAAAGGAGTGGTTGGAACAAACACTACCTTCTATTAGTATTTATGACAAGGATCTTATGATGAAGATCGTGGATCCGACCATGGTTGTCGACGAGGATTTCTTTGACGAGGTGTGGGCAATGGCCATTGTTGCTAAGTCTTGCCTGAATCCCAAACCTTCCAGACGACCCCAGATGAAATATGTCCTCAAGGCTCTCGAAAACCCTCTAAAAGTCATAAGGGAAGAGAGTTACAGCTCTGCTAGGCTTAGAACAACCTCTTCTAGAGGCTCCTGGCATGCTTCTTTATTCGGTAGTTGGCGCATGAGTTCTTCGGATGTAACAGTAAATCCGGCAGCCTCCGGTATAAGAGTAGAAGAAGGTGATTTTTCGTCGTCTCGTTGGCGGCATTCGAAGGAGATTTTCCCGGAGCCATCATCTAGCAGCATTCATGAATCATGA 2655 0.4185 MGDHRRRIVSFGFLFLLLFQFTFQQIEPLSSPIERAALLQLRSSLSLRSREWPLKADPCLIWNGVSCDENGRVIGINVSGFRRTRRGNQNPQFSIDALANFTLLQSFNASKFSLPGPIPHWFGRKLSSLRVLDLRSCSINGGIPSSIGNLTSLTGLYLSDNNLTGMIPSSISQLLGLSVLDLSQNSLTGPLPSSSSFAFLGNLSFLDLSSNYLSGSIPHGIGALSKLQYLNLSYNSLTSSIPTQLGALSSLVDLDLSGNSLSGFVPPNLMGLRTLQRMMLGNNILEGHLPGNFPAWSQLRFVVLRQNNFSGALPDKLWSLPRLSFLDVSGNNFTGVLPNSSSTVNANTALELNISHNLFYGGITPLLERFSFIDMSSNYLKGKVDFVLNASLDSNCLQNVSNQRTRVECVSFYSERGLAFDDFGRVNLTRPPAEESSGKSNGRKFILAVGLGVGGLISLLMLLLVWLLWRNRKRVNSNKKGVTVGNVVTRGGPPPPDVSINFAKVGDSFTYQQLLKAAGDFSDANLIKRGHTGDLFNGVLESGIPVVIKRVDMRSTKNENAYISELDFFSKVSHPRMVPLLGHCLENENEKFLVYKHMPNGDLLNCLNDRRTISEDGTVQSLDWITRLKIATGTAEALSYLHHECYPPLVHRDIQASSILLDDKYEVRLGSLSEACTQEGDTHQSRITRLLRLQQSSDQGTSGPSSSSVCASDVYCFGKVLLEMITGKLGISASGDAEVKEWLEQTLPSISIYDKDLMMKIVDPTMVVDEDFFDEVWAMAIVAKSCLNPKPSRRPQMKYVLKALENPLKVIREESYSSARLRTTSSRGSWHASLFGSWRMSSSDVTVNPAASGIRVEEGDFSSSRWRHSKEIFPEPSSSSIHES 884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g0710 884 Pfam Leucine rich repeat N-terminal domain 34 68 IPR013210 -
Sto2g0710 884 SMART LRR_typ_2 150 174 IPR003591 -
Sto2g0710 884 SMART LRR_typ_2 320 343 IPR003591 -
Sto2g0710 884 SMART LRR_typ_2 224 247 IPR003591 -
Sto2g0710 884 SMART LRR_typ_2 248 272 IPR003591 -
Sto2g0710 884 SMART LRR_typ_2 200 223 IPR003591 -
Sto2g0710 884 Gene3D Ribonuclease Inhibitor 199 403 IPR032675 -
Sto2g0710 884 SUPERFAMILY L domain-like 106 366 - -
Sto2g0710 884 ProSiteProfiles Protein kinase domain profile. 521 809 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto2g0710 884 SUPERFAMILY Protein kinase-like (PK-like) 500 804 IPR011009 -
Sto2g0710 884 PANTHER RECEPTOR-LIKE PROTEIN 55 12 190 - -
Sto2g0710 884 PANTHER RECEPTOR-LIKE PROTEIN 55 186 851 - -
Sto2g0710 884 Gene3D Phosphorylase Kinase; domain 1 497 597 - -
Sto2g0710 884 PRINTS Leucine-rich repeat signature 177 190 - -
Sto2g0710 884 PRINTS Leucine-rich repeat signature 224 237 - -
Sto2g0710 884 Gene3D Ribonuclease Inhibitor 32 198 IPR032675 -
Sto2g0710 884 PANTHER BNAA07G03560D PROTEIN 12 190 - -
Sto2g0710 884 PANTHER BNAA07G03560D PROTEIN 186 851 - -
Sto2g0710 884 Gene3D Transferase(Phosphotransferase) domain 1 598 823 - -
Sto2g0710 884 Pfam Leucine Rich Repeat 128 150 IPR001611 GO:0005515
Sto2g0710 884 Pfam Leucine rich repeat 273 333 IPR001611 GO:0005515
Sto2g0710 884 Pfam Leucine rich repeat 202 261 IPR001611 GO:0005515
Sto2g0710 884 Pfam Protein tyrosine and serine/threonine kinase 527 802 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g0710 Sto-Chr2 6076528 6080560 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g0710 34 695 Miscellaneous Gene Families AT2G16250 55.952 0.0 675
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIV Sto2g0710 PK_Tyr_Ser-Thr 1.3e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g0710 - - gmx:100805769 1093.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto2g0710 2 6076528 6080560 Sto2g0710 2 6076528 6080560 ECH