Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g0709 ATGGAACCAAAccagTCTCAAGCCCGGATAAAAGAGAAGGGTTGTGTTAGATTTAACACACCAGTGTTTAATCCTCTGTCCCCCAGCGATCCCGATGTGGGTTCTTCGTTGCCGCCTCTAAGAACTCTGTTTAAAGAGAATGTTGATGGTGAAGATGTGgacgaggaggaggaggagatgaTAATGCGTGCGATTGAGATTCGAAGGAAGGTGACGCAAGAGATTTTGATAGAAGCGATGAGAAAGGGGAAGTTTGGAATCACTTATGCTACCAATTTGGTTAACAGATTGACGGGTTTTATCGATTTTATTATGATTGAAGCTGCTTCTATGAAAAGATTGCCTCAGTATTCGCACTCTACTTTCAATTTTCGCGCCAAAACTGTTATAGAGGACTCCCAAGTTGTGCCTCTTATCAGATGGTTGAAGCATAATGACCTTTCTTATAATCGGATATCAAAGCTCATTTTGATGTCAAGGGGAAACCTCCAATCCATAAGACGTCTTGTTGAGTGGTTGAAGTCAGTGCATGTGAAAGGAGAATTTCTTGGGGTTGCACTTGTGAATGCTGGAGACAATATTCTGGAACGCACCAACGAGGAACTGGATGAGATTGTTGAGTACTTAGAGTGTGAAGGAGTCAGGAGGGATTGGATGGGTTACGTCATGAGTCGATCTCCTCAATTGTTGTCTTACAGCATGGAAGAAGTGAAGATTCGTGTGAAATTCTACCTAGATATGGGTTTAAATAAGCATGATTTTGGCACTATGGTTTTTGATTATCCTAAAGCACTTGGTTCCTTCACTCTGGAAGAAATGAATCAAAAGGTTAATTACTTGAAGGAGTTTGGGCTTAAAACTGAAGAGGTTGGAAGATTGCTAGCATTTAAGCCACATTTGATGGGTTGTAGCATTGAAGAAGAATGGAAGCCTCTTGCTAAGTATTTGTATTATTATGGGGTTACCCGAGATGGTATGAGGAGAATGCTCACCCTTAAACCAATGGTCTTTTGTATAGATTTGGAGACGAATATTGTGCCTAAGGTAAAGTTTTTTCAGGACTTAGGGATTCGAGATGATGCAATTGGCAACATGCTTGTAAAGTTTCCTACGCTACTCACATACAGTCTCCACAAGAAGATTAGGCCAGTGGTCATATTCTTGATGACTAAAGCTGGGGTCAGTGAGAAAGATATTGCCAAGGTTATAGCTATGGGACCAGAACTCTTGGGATGCAGCATAGTGCAAAAGCTTGAAGTaactctaaaatattatttgtcacTTGGTATACGTCTGAGGCAGTTGGGTGAGATGATTGCTGATTTCCCAATGCTGCTCAGATACAACGTTGATGTTCTCCGTCCCAAGTATACTTATCTGCGAAGAACAATGGTTCGGCCTCTCAAAGATCTCATTGAATTTCCAAGGTTTTTCAGCTATTCTCTGAATAGTCGAATTATTCCAAGGCACAAGGTTCTGGTGGAGAATCGGATTAGCTTGAAGCTGCGGTACATGTTGGCTTGCAGTGATGAAGAATTCAGAAAATTGGTTGACTCTAGAATTAGAAAACGACGCAGTTTGCAATCTGCAGgcattatgaatgatgatgatcatGATACTGTACTTACTGACCCCACCAGACATGAACAAATTGAATGA 1659 0.3954 MEPNQSQARIKEKGCVRFNTPVFNPLSPSDPDVGSSLPPLRTLFKENVDGEDVDEEEEEMIMRAIEIRRKVTQEILIEAMRKGKFGITYATNLVNRLTGFIDFIMIEAASMKRLPQYSHSTFNFRAKTVIEDSQVVPLIRWLKHNDLSYNRISKLILMSRGNLQSIRRLVEWLKSVHVKGEFLGVALVNAGDNILERTNEELDEIVEYLECEGVRRDWMGYVMSRSPQLLSYSMEEVKIRVKFYLDMGLNKHDFGTMVFDYPKALGSFTLEEMNQKVNYLKEFGLKTEEVGRLLAFKPHLMGCSIEEEWKPLAKYLYYYGVTRDGMRRMLTLKPMVFCIDLETNIVPKVKFFQDLGIRDDAIGNMLVKFPTLLTYSLHKKIRPVVIFLMTKAGVSEKDIAKVIAMGPELLGCSIVQKLEVTLKYYLSLGIRLRQLGEMIADFPMLLRYNVDVLRPKYTYLRRTMVRPLKDLIEFPRFFSYSLNSRIIPRHKVLVENRISLKLRYMLACSDEEFRKLVDSRIRKRRSLQSAGIMNDDDHDTVLTDPTRHEQIE 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g0709 552 Pfam mTERF 152 281 IPR003690 GO:0003690|GO:0006355
Sto2g0709 552 Pfam mTERF 162 342 IPR003690 GO:0003690|GO:0006355
Sto2g0709 552 Pfam mTERF 207 513 IPR003690 GO:0003690|GO:0006355
Sto2g0709 552 SMART mt_12 436 466 IPR003690 GO:0003690|GO:0006355
Sto2g0709 552 SMART mt_12 220 250 IPR003690 GO:0003690|GO:0006355
Sto2g0709 552 SMART mt_12 327 358 IPR003690 GO:0003690|GO:0006355
Sto2g0709 552 SMART mt_12 468 499 IPR003690 GO:0003690|GO:0006355
Sto2g0709 552 SMART mt_12 400 431 IPR003690 GO:0003690|GO:0006355
Sto2g0709 552 SMART mt_12 291 322 IPR003690 GO:0003690|GO:0006355
Sto2g0709 552 SMART mt_12 255 286 IPR003690 GO:0003690|GO:0006355
Sto2g0709 552 SMART mt_12 363 395 IPR003690 GO:0003690|GO:0006355
Sto2g0709 552 MobiDBLite consensus disorder prediction 533 552 - -
Sto2g0709 552 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF2, CHLOROPLASTIC 60 536 - -
Sto2g0709 552 Gene3D Transcription termination factor 3, mitochondrial 116 278 IPR038538 -
Sto2g0709 552 Gene3D Transcription termination factor 3, mitochondrial 279 520 IPR038538 -
Sto2g0709 552 PANTHER CGI-12 PROTEIN-RELATED 60 536 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g0709 Sto-Chr2 6069097 6075294 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Sto2g0709 mTERF 1.2e-67 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g0709 K15032 - mnt:21401514 762.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto2g0709 2 6069097 6075294 Sto2g0709 2 6069097 6075294 ECH