Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g0703 ATGGTCTCCGACGACTCCCCCGGCCGCGCTCTCCCTGAGCTATCCAACACCGCCACTCCGTTTCTAGGTCTGAAGCTCTACTTCGTGATCGGCATTTTTCTTGTGATCGTGGCAGTTGTCTTGCTTCTGATCTTTCTCTGCGTTCGCCGGAGTCGGACATCGTCCGCGCGGAAAATGCGCGTGAAGCACAGTTCCGGCATGATTCCGCTGGTCTCCAAGGAGATCGTGGAGGTTAAAGCGTTGGATCTAGAGCAGAACTGTGAGCAAGCTGAGGTTGAAATCGAAGACGGTGatttgaagaaggagaaggagaaggagaaggagagagagaaggaggaggttAAGGTTGGGAAGAGCAGCGGCGAGCAGAGTGACGTGTCCGGTGGGAGCCGCAGCGGCGACGTGTCGGTGGATGGTCCGAACATTGGGTGGGGGCGGTGGTATAGCTTGAGGGAGCTGGAGGTTGCGACACGTGGCTTTGCGGAAGAGAATGTGATCGGGGAAGGAGGGTATGGGATTGTGTATAGAGGAGTTCTTGAAGATGGGTCTGTAGTGGCTGTCAAGAATCTTCTCAACAATAAGGGTCAAGCAGAGAAGGAATTTAAAGTGGAGGTTGAAGCTATTGGAAAAGTAAGGCATAAGAATTTGGTGGGTTTAGTTGGATATTGTGCAGAAGGACCCCAAAGGATGCTCGTTTATGAATATGTTGACAATGGAAATTTGGAGCAGTGGTTGCATGGTGATGTAGGGCCTGTTAGCCCCTTGACTTGGGATATACGAATGAGGATTGCCATTGGGACAGCAAAAGGGCTGGCCTATCTGCATGAAGGGTTGGAACCCAAAGTGGTTCACCGAGATGTGAAATCTAGTAACATTCTTTTGGACAAAAAGTGGACAGCCAAAGTAGCAGACTTTGGACTGGCCAAGCTTCTAGGCTCTGAGAAGAGTTATGTGACTACACGAGTAATGGGAACATTTGGATATGTTTCACCTGAGTATGCAAGCACGGGCATGCTTAATGAGGGAAGTGACGTGTATAGTTTTGGAGTTCTACTCATGGAGATGATTACAGGAAGAAGCCCCATTGATTATTCTAGACCACCTGGAGAGATGAATTTGATTGATTGGTTCAAGGCAATGGTAGCAAGTCGTCGCGGTGAAGAGCTGATAGATCCTTTGATTGAGGTTCAGCCCACTCCAAGATCTTTGAAGCGAGCTTTACTGGTTTGTCTGCGCTGTATAGATTTGGATGTCAGCAAGCGACCAAAGATGGGTCAAATTGTTCATATGCTCGAGGCAGATGATTTCCCCTTCCGTTCTGAACTTCGCACAATAAGAGAGAAAGAGTCTGCGCCTTCTTCTCATGCACCTGTTTCCAGTAAAGTTCCATATCCACCAAAGCATGTGGAGTCACTAGAACAATCAAGATGGAGATGA 1437 0.4704 MVSDDSPGRALPELSNTATPFLGLKLYFVIGIFLVIVAVVLLLIFLCVRRSRTSSARKMRVKHSSGMIPLVSKEIVEVKALDLEQNCEQAEVEIEDGDLKKEKEKEKEREKEEVKVGKSSGEQSDVSGGSRSGDVSVDGPNIGWGRWYSLRELEVATRGFAEENVIGEGGYGIVYRGVLEDGSVVAVKNLLNNKGQAEKEFKVEVEAIGKVRHKNLVGLVGYCAEGPQRMLVYEYVDNGNLEQWLHGDVGPVSPLTWDIRMRIAIGTAKGLAYLHEGLEPKVVHRDVKSSNILLDKKWTAKVADFGLAKLLGSEKSYVTTRVMGTFGYVSPEYASTGMLNEGSDVYSFGVLLMEMITGRSPIDYSRPPGEMNLIDWFKAMVASRRGEELIDPLIEVQPTPRSLKRALLVCLRCIDLDVSKRPKMGQIVHMLEADDFPFRSELRTIREKESAPSSHAPVSSKVPYPPKHVESLEQSRWR 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g0703 478 Gene3D Phosphorylase Kinase; domain 1 144 235 - -
Sto2g0703 478 CDD STKc_IRAK 166 432 - -
Sto2g0703 478 MobiDBLite consensus disorder prediction 101 119 - -
Sto2g0703 478 Coils Coil 73 107 - -
Sto2g0703 478 MobiDBLite consensus disorder prediction 101 137 - -
Sto2g0703 478 Pfam Protein kinase domain 161 429 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto2g0703 478 SMART serkin_6 160 438 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto2g0703 478 ProSitePatterns Serine/Threonine protein kinases active-site signature. 282 294 IPR008271 GO:0004672|GO:0006468
Sto2g0703 478 SUPERFAMILY Protein kinase-like (PK-like) 136 432 IPR011009 -
Sto2g0703 478 ProSiteProfiles Protein kinase domain profile. 160 424 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto2g0703 478 ProSitePatterns Protein kinases ATP-binding region signature. 166 188 IPR017441 GO:0005524
Sto2g0703 478 Gene3D Transferase(Phosphotransferase) domain 1 236 443 - -
Sto2g0703 478 MobiDBLite consensus disorder prediction 447 478 - -
Sto2g0703 478 PANTHER OS01G0323000 PROTEIN 13 449 - -
Sto2g0703 478 PANTHER OS03G0227900 PROTEIN 13 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g0703 Sto-Chr2 5991241 5994666 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g0703 6 434 Trihelix Transcription Factor Family AT1G70460 40.460 2.64e-95 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Sto2g0703 Pkinase 1.6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g0703 - - jre:109011190 686.797
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto2g0703 2 5991241 5994666 Sto2g0703 2 5991241 5994666 ECH
Sto2g0703 2 5991241 5994666 Sto10g0174 10 1429560 1432505 ECH
Sto5g1173 5 7872836 7875409 Sto2g0703 2 5991241 5994666 ECH
Sto9g3543 9 34440227 34442486 Sto2g0703 2 5991241 5994666 ECH