Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g0634 ATGGCCTCGCTTCCTCCTCCGCAACTCAGCTTGGATTTGAGACCTACTTTCGTTCCCAAGACGATCACTGATCTCCTCTACGAGGTTTCCTCGATCCGCAATGCCGCCGATAAGCTCCTGCGCCTCGACGATTTCGTCAAGAGATTGGAAGAGGAGATGAGGAAGATTGACGCGTTCAGGCGCGAGCTTCCTCTCTGCATGTTCCTCTTGAATGATGCAATTTTAGTCCTGAAGGAGGAATCAGCAAAATTCAGGACACCTAATTCTCAACCAGTGTTGGAAGAATTTATTCCCTTGAGGAAAGAATGTGATCAAAAGGaggaaaatgaaaaagagaaggaatgcagagataagaaaaattggATGAGTTCCGTTCAGCTCTGGAACACTCCTAATTATCTCACTACAAATAATGCTTGTGAACAAAAACAACATTATAAATTAGAAAACAAGAAAAACGAAGAAGAAGCACAATCTATGCCTGAGGATCCTTTCCAATCttgtagaaatagaaatggaagtgGAGTGTTTATGCCCTTTACAACATACCCTGCTGTCCCTGTGGCAACCAAGGAGGAAAAGGAAGAGTCTGATATTAATGGACTATCTCTTGTGACTCCTGGAATTAAAAATCTGAGAGAGGGATCTGGTTCTAGTGGATCAAGAATCAGCTCTAGCAGAGCTGTTTCATCATCTCCTTCCAGTGAACAACCAAGTTTACGCTCCACACAGCAGCAGACTGCCCGGAAACAGAGAAGATGTTGGTCACCAGAGTTGCATCGCCGATTTGTCAATGCCCTGCAGCAACTAGGAGGTTCTCAAGCTGCAACCCCAAAGCAAATTAGAGAACTCATGCAAGTTGATGGCCTGACCAACGACGAAGTAAAGAGTCATTTACAAAAATATCGACTTCATACTCGAAGACTTCCAGCTTCCACACCTACACCTGGTAATCAGTCTGTTGTAGTTCTTGGTGGTTTATGGATGTCCCAAGATCAGTATAATGACTCCACCAAGGGTAGTATTTCAGGGTCTGGCTCTCCTCAAGGTCCCCTCCAATTAGCTGCAGGATCCGGGGGAGGGAACTCCCCAACTGAGGATGACAGCttggaagatgatgaagatgaaaaatCCAGAGAGCTATAG 1146 0.4232 MASLPPPQLSLDLRPTFVPKTITDLLYEVSSIRNAADKLLRLDDFVKRLEEEMRKIDAFRRELPLCMFLLNDAILVLKEESAKFRTPNSQPVLEEFIPLRKECDQKEENEKEKECRDKKNWMSSVQLWNTPNYLTTNNACEQKQHYKLENKKNEEEAQSMPEDPFQSCRNRNGSGVFMPFTTYPAVPVATKEEKEESDINGLSLVTPGIKNLREGSGSSGSRISSSRAVSSSPSSEQPSLRSTQQQTARKQRRCWSPELHRRFVNALQQLGGSQAATPKQIRELMQVDGLTNDEVKSHLQKYRLHTRRLPASTPTPGNQSVVVLGGLWMSQDQYNDSTKGSISGSGSPQGPLQLAAGSGGGNSPTEDDSLEDDEDEKSREL 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g0634 381 MobiDBLite consensus disorder prediction 212 252 - -
Sto2g0634 381 Pfam Myb-like DNA-binding domain 252 303 IPR001005 -
Sto2g0634 381 MobiDBLite consensus disorder prediction 152 173 - -
Sto2g0634 381 SUPERFAMILY Homeodomain-like 247 308 IPR009057 -
Sto2g0634 381 Gene3D - 249 307 - -
Sto2g0634 381 Coils Coil 138 158 - -
Sto2g0634 381 Coils Coil 32 62 - -
Sto2g0634 381 MobiDBLite consensus disorder prediction 208 255 - -
Sto2g0634 381 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 247 307 IPR017930 -
Sto2g0634 381 MobiDBLite consensus disorder prediction 335 381 - -
Sto2g0634 381 PANTHER TRANSCRIPTION FACTOR HHO6 8 379 - -
Sto2g0634 381 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 8 379 IPR044787 GO:0003700|GO:0006355
Sto2g0634 381 MobiDBLite consensus disorder prediction 335 365 - -
Sto2g0634 381 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 250 305 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g0634 Sto-Chr2 5378509 5380600 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g0634 8 329 G2-like Transcription Factor Family AT2G03500 41.493 1.18e-67 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Sto2g0634 Myb_DNA-binding 6.1e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g0634 - - rcn:112174025 451.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto2g0634 2 5378509 5380600 Sto2g0634 2 5378509 5380600 ECH