Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g0627 ATGGGGGTTTGTACTTCCAAGCCGCAGAAGCCGAACCCGTTTTCCGGTCGGGAACCGGAGGAGGATGACCATGGGTCGTACGATCCATCATCGCAAATCCCTAAAAACCCACTTACTCCTAAGCATGAGGTTGTTTCTTCTGGGAAGCAGTCTCCGTTCTTCCCCTTCTACAGCCCTAGCCCAGCTCGTTTCTTTAAGAAATCTCCGGCGCCGACGGGAGGAGGGGGGACCCGAAGTGCGAGCTCGACGCCGGGGAGATTTTTCCGGCGACCATTCCCTCCGCCGTCTCCGGCGAAACACATTAAGGCGTTGCTAGCGAGGAGACAGGGGAAGAAGACCTCGACGGCCATACCGGAAGACGGAGAGGAGGTGGATTTGGACAAGAGGTTTGGATTTTCCAAGGAGTTTACCAGTAGGCTGGAGGTTGGGGAAGAAGTGGGCAGAGGGCATTTTGGGTATACTTGTTCTGCGAGGTTCAAGAAGGGCGAGCTTAAGGGTCAGCAAGTCGCAGTTAAGGTCATCCCTAAAGCTAAGATGACAACAGCAATTGCAATTGAAGATGTAAGAAGGGAGGTGAAAATATTGCGAGCTCTGACTGGACACAACAATCTGATACAATTCTATGATGCATTTGAAGATCAGGATAATGTGTATATTGTTATGGAGTTATGTGAAGGAGGGGAACTTTTAGATAGGATACTATCAAGAGGAGGGAAATACTCAGAAGAAGATGCAAAGGCTGTCATGGTACAGATACTAAACGTTGTTGCATTTTGTCATCTTCAGGGTGTGGTGCACCGAGATCTAAAGCCAGAGAATTTTCTGTACGCTTCGAAGGATGAGAATTCTGAGTTAAAAGCTATAGACTTCGGATTATCGGATTTTGTCAAACCAGATGAAAGGCTCAATGACATTGTTGGTAGTGCGTACTATGTGGCACCCGAAGTTCTACATAGATCGTACAGTACAGAAGCTGATGTGTGGAGTATAGGTGTAATAGCATATATTCTCTTATGCGGTAGTCGCCCTTTTTGGGCCCGAACAGAGTCTGGTATCTTTAGGGCAGTTTTGAAAGCTGATCCAAGCTTTGATGAAGCTCCGTGGCCTTCATTATCTCCAGAAGCAAAAGATTTTGTAAAGCGTTTATTAAATAAGGATCCACGGAAGCGAATATCAGCTGCACAGGCCTTAAGTCATCCTTGGATACGAAATTACAATAACGTAAAAGTTCCTCttgacattttaatatttagGCTCATGAAGGCCTATATGCGATCTTCATCCTTGCGGAAGGCTGCCTTAAGGGCCTTGTCCAAGACACTGACAGCTGATGAACTATATTATCTGAAGGAGCAATTTGCTATGTTGGGGCCTAGCAAAAATGGCAGCATAACCTTAGAGAACATTAGGACGGCCCTAATGAAACATGCAACAGAAGCCATGAAAGAATCTCGCATCCCTGATTTTCTTGCCTCGCtaaattcattacaatataGAAGAATGGATTTCGAAGAGTTTTGTGCAGCTGCATTGAGTGTGCATCAGCTTGAAGCTCTAGATCGCTGGGAACAACATGCTCGCTGTGCTTATGAACTTTTCGAGAAAGATGGAAACAGGGCTATTATCATCGAAGAACTTGCGTCGGAGCTTGGACTCGGTCCTTCCATCCCGGTTCATGTCGTACTCCAGGACTGGATAAGACACACTGATGGGAAGCTAAGCTTTCTCGGGTTTGTGAAATTGTTACATGGGGTATCAAGCCGAACTCTCGCGAAGGTGCAATAA 1785 0.4588 MGVCTSKPQKPNPFSGREPEEDDHGSYDPSSQIPKNPLTPKHEVVSSGKQSPFFPFYSPSPARFFKKSPAPTGGGGTRSASSTPGRFFRRPFPPPSPAKHIKALLARRQGKKTSTAIPEDGEEVDLDKRFGFSKEFTSRLEVGEEVGRGHFGYTCSARFKKGELKGQQVAVKVIPKAKMTTAIAIEDVRREVKILRALTGHNNLIQFYDAFEDQDNVYIVMELCEGGELLDRILSRGGKYSEEDAKAVMVQILNVVAFCHLQGVVHRDLKPENFLYASKDENSELKAIDFGLSDFVKPDERLNDIVGSAYYVAPEVLHRSYSTEADVWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPSLSPEAKDFVKRLLNKDPRKRISAAQALSHPWIRNYNNVKVPLDILIFRLMKAYMRSSSLRKAALRALSKTLTADELYYLKEQFAMLGPSKNGSITLENIRTALMKHATEAMKESRIPDFLASLNSLQYRRMDFEEFCAAALSVHQLEALDRWEQHARCAYELFEKDGNRAIIIEELASELGLGPSIPVHVVLQDWIRHTDGKLSFLGFVKLLHGVSSRTLAKVQ 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g0627 594 MobiDBLite consensus disorder prediction 1 52 - -
Sto2g0627 594 Gene3D Phosphorylase Kinase; domain 1 142 229 - -
Sto2g0627 594 ProSiteProfiles Protein kinase domain profile. 140 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto2g0627 594 PANTHER CDPK-RELATED KINASE 2 39 588 - -
Sto2g0627 594 ProSitePatterns Serine/Threonine protein kinases active-site signature. 264 276 IPR008271 GO:0004672|GO:0006468
Sto2g0627 594 CDD STKc_CAMK 141 401 - -
Sto2g0627 594 SUPERFAMILY EF-hand 430 584 IPR011992 -
Sto2g0627 594 ProSitePatterns Protein kinases ATP-binding region signature. 146 172 IPR017441 GO:0005524
Sto2g0627 594 PANTHER SERINE/THREONINE-PROTEIN KINASE 39 588 - -
Sto2g0627 594 MobiDBLite consensus disorder prediction 14 28 - -
Sto2g0627 594 MobiDBLite consensus disorder prediction 64 94 - -
Sto2g0627 594 MobiDBLite consensus disorder prediction 29 52 - -
Sto2g0627 594 SUPERFAMILY Protein kinase-like (PK-like) 136 437 IPR011009 -
Sto2g0627 594 Gene3D - 442 511 - -
Sto2g0627 594 Gene3D - 423 581 - -
Sto2g0627 594 Pfam Protein kinase domain 141 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto2g0627 594 Gene3D Transferase(Phosphotransferase) domain 1 230 422 - -
Sto2g0627 594 SMART serkin_6 140 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g0627 Sto-Chr2 5310355 5315624 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g0627 1 590 EF-hand Containing Proteins AT3G50530 71.949 0.0 926
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Sto2g0627 Pkinase 6.1e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g0627 - K00924 gmx:100807672 1024.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto2g0627 2 5310355 5315624 Sto2g0627 2 5310355 5315624 ECH