Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g0606 ATGGTCGACACCCTCACCAACGTCGTCATCGGCTCCACCTCCGAATTTCGCTTGCCCAGCTCCGACACGTGCCGCGAATGCGGGATCGCCGACTGCTTGGGCTGCAATTATTTCCccgaagaaaataataataataataataacaataataatggcGGGAAGCAGAAGAAAAAGACGGTGAGAgaggataataataataatgggaaGAAGTATAGGGGAGTGAGACAGCGCCCGTGGGGGAAATGGGCCGCGGAGATCCGCGACCCGAGACGGGCCGCCCGGGTTTGGTTGGGTACCTTCAGTACGGCCGAGGAAGCGGCCCAAGCCTACGACAAAGCCGCCATCGAGTTCCGTGGGCCCCGCGCCAAGCTCAATTTCCCTTTCCCCGATAATTCCCTCCACCAGCTCACCAACTCGCAGCCGGAATCGTCCGTGATGGCGGCGGCGGCGTCGACCTCCACGGCGGCGGCGGAGGAATGTGAGTTCTGGGAGAGGATAAGAGACGCTAAATTGGAGCAGTTCATGATGATGGATTTCGGCGACGAAGATTCTTCCGgtattgTTGTATTGAAGAGAATTAAAGACAATTTTATTCGAGTTAATTGA 606 0.5099 MVDTLTNVVIGSTSEFRLPSSDTCRECGIADCLGCNYFPEENNNNNNNNNNGGKQKKKTVREDNNNNGKKYRGVRQRPWGKWAAEIRDPRRAARVWLGTFSTAEEAAQAYDKAAIEFRGPRAKLNFPFPDNSLHQLTNSQPESSVMAAAASTSTAAAEECEFWERIRDAKLEQFMMMDFGDEDSSGIVVLKRIKDNFIRVN 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g0606 201 ProSiteProfiles AP2/ERF domain profile. 70 127 IPR001471 GO:0003700|GO:0006355
Sto2g0606 201 Pfam AP2 domain 70 119 IPR001471 GO:0003700|GO:0006355
Sto2g0606 201 PRINTS Ethylene responsive element binding protein signature 71 82 IPR001471 GO:0003700|GO:0006355
Sto2g0606 201 PRINTS Ethylene responsive element binding protein signature 93 109 IPR001471 GO:0003700|GO:0006355
Sto2g0606 201 SUPERFAMILY DNA-binding domain 70 128 IPR016177 GO:0003677
Sto2g0606 201 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF109 1 183 - -
Sto2g0606 201 MobiDBLite consensus disorder prediction 40 74 - -
Sto2g0606 201 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 1 183 - -
Sto2g0606 201 SMART rav1_2 70 133 IPR001471 GO:0003700|GO:0006355
Sto2g0606 201 MobiDBLite consensus disorder prediction 55 70 - -
Sto2g0606 201 MobiDBLite consensus disorder prediction 40 54 - -
Sto2g0606 201 CDD AP2 69 127 IPR001471 GO:0003700|GO:0006355
Sto2g0606 201 Gene3D AP2/ERF domain 69 128 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g0606 Sto-Chr2 5150118 5150910 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g0606 59 127 AP2-EREBP Transcription Factor Family AT2G33710 76.812 2.54e-33 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Sto2g0606 AP2 2.6e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g0606 - - ccaj:109799734 186.037