Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g0591 atGCCTGGAAGTTTAGAGCCGTTGGATTTGGGGGTTCAGATTCCATACCACTTCAGGTGTCCGATCTCCCTCGAGCTGATGCGTGACCCGGTCACCGTCTGCACCGGTCAGACCTACGATCGAGCCAGCATCGAGTCATGGGTGGCAACCGGCAACACCACCTGCCCAGTCACCCGCTCTCCACTCACCGATTTTACCCTTATTCCCAATCACACCCTTCGCCGCCTTATCCAGGATTGGTGCGTCGCTAACCGGGCTTTCGGAATTGAGCGTATTCCCACTCCCAAACAACCCGCTGAGCCCACCTTGGTTCGTTCCTTGTTGAACCAATCATCCTCCGAGTCCGCTCCCACTCATTCTCGCCTCTCTGCTTTGCGTCGACTCAGAGGACTCGCTCGTGACTCGGACAAGAATCGCTCTCTCATTGCCTCCTTCAACGTCCGCGAAATCCTTCTCCCTATTGTTTTCTCCAATTTTGCCTCCGATTCCTCCGAGTTGAGCCACGAGTCACTCGCGTTGCTCGTTCTGTTTCCCCTCGCCGAGTCGGAATGCACCGCCATCGCGTCGGATCTTGAGAGAATCAGGTATCTCTCGCGCCTTCTCTTCCACGCGTCCGCCGACGTCCGAGTCAACTCGGCCGCGCTGATCGAGATCGTCGTCGCCGGGACTCGTTCGCCGGAGATCCGATCGGAGATCAGCGGCATCGACGAAATCTACGACGGAGTCATCGACATTCTGAAACTCCCGATTGCGCATCCTCGCGCTCTCAAGATCGGCATCAAGGCGCTGTTCGCCCTGTGCTTGGTGAAACAGACGCGGCACAAGGCGGTCCTCGCCGGAGCGCCGGAGATCCTCGTCGACCGGCTTCCGGATTTCGAGAAATGCGACGCCGAGAGAGCTCTGGCAACGATCGAGCTGCTGTGCCGGATCCCGGCCGGATGCGAGGCGTTTGCAGCGCACGCGCTGACGGTGCCGCTGCTGGTGAAGATAATACTGAAGATATCAGATCGGGCGACGGAGTACGCCGCCGGAGCTCTGCTGTCGCTGTGCTCGGAATCGGAGGGGAGCCAGAGGGAGGCGGTGGCGGCGGGGGTGCTGACTCAGCTGCTGTTGCTGGTGCAGAGTGATTGCACAGAGAGGGCGAAGAGGAAGGCGCAGATGTTGCTGAAGCTTCTTCGGGATTCGTGGCCGCAACAAGATTCCCTTGGGAATTCAGACGATTTTGCATGCAGTGAAGgGGTTACAGAATCAAATTATAGAATAGTTGATGAGTGGAAGAGGAAAGAACATTCACTGACACATGATGAAGTACAGGTTTGTGATAGCTCCACAGAGGGAAGTGTTTTTGACTTTGAAGGAACCTCATTTTGA 1371 0.5675 MPGSLEPLDLGVQIPYHFRCPISLELMRDPVTVCTGQTYDRASIESWVATGNTTCPVTRSPLTDFTLIPNHTLRRLIQDWCVANRAFGIERIPTPKQPAEPTLVRSLLNQSSSESAPTHSRLSALRRLRGLARDSDKNRSLIASFNVREILLPIVFSNFASDSSELSHESLALLVLFPLAESECTAIASDLERIRYLSRLLFHASADVRVNSAALIEIVVAGTRSPEIRSEISGIDEIYDGVIDILKLPIAHPRALKIGIKALFALCLVKQTRHKAVLAGAPEILVDRLPDFEKCDAERALATIELLCRIPAGCEAFAAHALTVPLLVKIILKISDRATEYAAGALLSLCSESEGSQREAVAAGVLTQLLLLVQSDCTERAKRKAQMLLKLLRDSWPQQDSLGNSDDFACSEGVTESNYRIVDEWKRKEHSLTHDEVQVCDSSTEGSVFDFEGTSF 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g0591 456 Pfam U-box domain 14 85 IPR003613 GO:0004842|GO:0016567
Sto2g0591 456 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 4 412 - -
Sto2g0591 456 PANTHER WDSAM1 PROTEIN 4 412 IPR045185 GO:0061630
Sto2g0591 456 SUPERFAMILY ARM repeat 103 392 IPR016024 -
Sto2g0591 456 CDD RING-Ubox_PUB 18 59 IPR045210 -
Sto2g0591 456 Gene3D - 94 406 IPR011989 -
Sto2g0591 456 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 13 87 IPR013083 -
Sto2g0591 456 SMART Ubox_2 17 80 IPR003613 GO:0004842|GO:0016567
Sto2g0591 456 SUPERFAMILY RING/U-box 12 90 - -
Sto2g0591 456 ProSiteProfiles U-box domain profile. 13 87 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g0591 Sto-Chr2 4994708 4996366 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g0591 1 414 U-box Gene Family AT3G19380 67.458 0.0 545
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g0591 - - gmx:100778730 673.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto2g0591 2 4994708 4996366 Sto2g0591 2 4994708 4996366 ECH