Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g0588 ATGTCTAATCAAGAACAAGATCCAAACATGACTCCATGGCCTCTCTTCGATTTCGATGATAACACCCATCAGAAATCCAACATCAACCCTAATTGTtccaataatattaaaattattgataGTAAGGAAGGAGAGCCAGAGGCaagtggtggtggtagtggtgACAACACGATCAAAAGTACAAGGAGAAGCCGAGGAAAGAGGATTATGAGTAGTGGAAGCAAAAGAAAGAGGACGAACAAGATGAGGAACAATTTCTCTGACCTTCATGCTTTGCTTCCTCACCTTCCTCCCCagGAAGCAGTGAAGTACATAAAAAGTATGGAATCCGAACTCCAAAagcttgaaaaagaaaatgaggaaagGCTTAAACTCCAACAGATTCAATCTGCTTCAACCACACTTGAGTCTCCTGCTTCACAGTGGCTTCAATATCCCTATGATCACAATAATTCtagcaacaataataatattaatggcaACAACTTTGTGAGCGCCGCCAATACTGAAAACgacattaataatattattggaactccctctaataataataataataataatgtgaatTACAATAATAGCCTTGAAGTAGGGTTTCGCACATGGTTTTCTCCAAATGTTGTGCTGAACACTTTGGGTGAAATGGCTCAGTTGTGTGTGTGTTATCCCAAGAATCTTCGCCTCTCCGCCATCATCGCCTATGTGCTTCAGAAGCATAACATTGACGTTTTGTCTCCTTATATTTCTTCTGATCACAATCGAAGATTTTACGTCATTCAAGCACagATAAATGGAGATTCAAATGAGTTTTCGGATAGATATTCAGCGGAGGAAATATTCTTGCGAGCTGCAGAAGAAATTGTAATGTGGATATCTTAA 879 0.3402 MSNQEQDPNMTPWPLFDFDDNTHQKSNINPNCSNNIKIIDSKEGEPEASGGGSGDNTIKSTRRSRGKRIMSSGSKRKRTNKMRNNFSDLHALLPHLPPQEAVKYIKSMESELQKLEKENEERLKLQQIQSASTTLESPASQWLQYPYDHNNSSNNNNINGNNFVSAANTENDINNIIGTPSNNNNNNNVNYNNSLEVGFRTWFSPNVVLNTLGEMAQLCVCYPKNLRLSAIIAYVLQKHNIDVLSPYISSDHNRRFYVIQAQINGDSNEFSDRYSAEEIFLRAAEEIVMWIS 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g0588 292 Coils Coil 105 128 - -
Sto2g0588 292 MobiDBLite consensus disorder prediction 20 38 - -
Sto2g0588 292 MobiDBLite consensus disorder prediction 1 81 - -
Sto2g0588 292 MobiDBLite consensus disorder prediction 63 80 - -
Sto2g0588 292 PANTHER - 41 290 IPR044278 GO:0003700|GO:0006355|GO:0009960
Sto2g0588 292 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 64 123 IPR036638 GO:0046983
Sto2g0588 292 Gene3D - 58 137 IPR036638 GO:0046983
Sto2g0588 292 PANTHER TRANSCRIPTION FACTOR BHLH95 41 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g0588 Sto-Chr2 4973271 4975348 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g0588 74 292 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G49770 30.705 4.88e-20 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g0588 - - rcu:8275281 138.272
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto2g0588 2 4973271 4975348 Sto2g0588 2 4973271 4975348 ECH