Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g0566 ATGCATAGACCAAGAATGGGTGGTATCATCTCTTTGTATGTATCACTCTTCTTGTTTTATGCTTTCCTCTTTCACTCTTCATACTCTAATTATGATGTGCCTCCTCCCTCACAATATATAACTAGTGATGATGGCTACTATGAACCTTCTCCCCCAAAATGTAGCGACTGTGAAGAGCCTCCACCTCTTCACCCTAATACATTTTGGTGCCCAAATACTTTCTGGTGGTGTTATTCACCTCCGCCGCCACCTCCgtctccaccaccaccatctcCACCGCCGCCTCCATCACCGCCGCCACCATCACCACCGCCGCCTCCATCACCTCCACCACCATCACCACCGCCGCCACGACCACCACCGCCGCCACGACGACGACCGGTAAACCGGCTGAAGAGAGCGCGACGCGCGCTGCAAAATTTCAAGGCTAATATCTTTGACCCCACTGGATACACCAAAAACTGGAATAACGCCACCGACACGTGTCGGTACAACGGCGTCCTCTGCGCCAAATTTCCCAACGATGTGCAACGCGCGGTCGCGGGAGTGAACTTAAACGGAGCGGGAATCTCGGGCAAGGGAGGTACGGATTTGACGCTGTCGGGAATCTTGGACAAGATTCCGGAATTAGTATTCTTCCACGTCAACTCCAACTCCTTCACTGGAAATTTCTCAGAAGAAATCGCGAAATTCCAATATTTCTACGAGCTCGACCTCAGCAACAACAAATTAAAAGGCTTATTCCCCAAACAAGTCCTTCAGTTCAAACAATTACTCTTCTTAGATCTCAGGTTTAACTCACTCTCCGGCCCAATTCCACCCCAGCTCTTCGAGAGGGATCTAGACGTTATCTTTATTAACAACAATTTCTTCACGCAAAACCTCCCTGACAACTTAGGGTCCACACCGGCCAGGTATATCACTTTCGCGAACAATAAATTAACGGGTCCTATCCCAAGCAGCATTGGAAAAGCCGGGAATACCCTCACGGAAGTGCTTTTCCTGGGGAATGACTTTTCCGGGTGCTTACCGTACGAGATCGGGTTCCTTAAGAAAGCCACGGTGTTCGACGTCAGCAAGAATTCCCTCACGGGTCCCATCCCGCTGTCGTTTGGTTGCTTGGAGAGCATTGAGTTTCTGAGCCTGGCGGAGAACAAGTTCTACGGCGCCGTTCCGGAGGCGCTGTGCGGTCTCCCGGGGCTCCGGAACGGCGGGAAGTTGACGCTGTCGCATAACTACTTCACGCAGGTGGGGCCCAAGTGTTTGATGCTGGTGCACGCGAATGTGTTGGACGTGAGTGGGAATTGCATTCGGGGGCTTCCGTATCAGAGGCCGGGAGGTGAGTGTAAGGCGTTTTTCTCTAAGGTCACGCCTTGTCCTAACCCCAAGTCGTTAAGCATTGTGCCGTGTAAGAAGTATTCTTTGGCGGGGACGGTCGAGGCGGCACCACCGGCGGTGGGTTATTCGCGGCCCACGCCGGTGACCTACAAGTCTCTGAAACCACATCGACTGTCCCATGGGTGGTTCCGTGGAAATAGTGTGTAA 1545 0.5152 MHRPRMGGIISLYVSLFLFYAFLFHSSYSNYDVPPPSQYITSDDGYYEPSPPKCSDCEEPPPLHPNTFWCPNTFWWCYSPPPPPPSPPPPSPPPPPSPPPPSPPPPPSPPPPSPPPPRPPPPPRRRPVNRLKRARRALQNFKANIFDPTGYTKNWNNATDTCRYNGVLCAKFPNDVQRAVAGVNLNGAGISGKGGTDLTLSGILDKIPELVFFHVNSNSFTGNFSEEIAKFQYFYELDLSNNKLKGLFPKQVLQFKQLLFLDLRFNSLSGPIPPQLFERDLDVIFINNNFFTQNLPDNLGSTPARYITFANNKLTGPIPSSIGKAGNTLTEVLFLGNDFSGCLPYEIGFLKKATVFDVSKNSLTGPIPLSFGCLESIEFLSLAENKFYGAVPEALCGLPGLRNGGKLTLSHNYFTQVGPKCLMLVHANVLDVSGNCIRGLPYQRPGGECKAFFSKVTPCPNPKSLSIVPCKKYSLAGTVEAAPPAVGYSRPTPVTYKSLKPHRLSHGWFRGNSV 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g0566 514 MobiDBLite consensus disorder prediction 85 124 - -
Sto2g0566 514 SUPERFAMILY L domain-like 134 438 - -
Sto2g0566 514 MobiDBLite consensus disorder prediction 85 127 - -
Sto2g0566 514 Pfam Leucine rich repeat N-terminal domain 133 169 IPR013210 -
Sto2g0566 514 PANTHER BNAC05G26270D PROTEIN 110 478 - -
Sto2g0566 514 Gene3D Ribonuclease Inhibitor 305 467 IPR032675 -
Sto2g0566 514 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 110 478 - -
Sto2g0566 514 Gene3D Ribonuclease Inhibitor 132 303 IPR032675 -
Sto2g0566 514 PRINTS Proline rich extensin signature 50 62 - -
Sto2g0566 514 PRINTS Proline rich extensin signature 82 94 - -
Sto2g0566 514 PRINTS Proline rich extensin signature 94 115 - -
Sto2g0566 514 PRINTS Proline rich extensin signature 116 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g0566 Sto-Chr2 4805838 4810024 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g0566 130 459 Trihelix Transcription Factor Family AT1G12040 42.342 4.16e-79 260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g0566 - - gmx:100795489 486.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto2g0566 2 4805838 4810024 Sto2g0566 2 4805838 4810024 ECH