Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g0563 ATGTCGATTACCGGCATTCATGGCCAACTCCTTGAGGTTACTGTCGTATCGGGCTACAAGTTGAAGGACACGGAATGGATTTCAAGACAGGACCCTTATGTGTGCCTTGAATATGGTAGCACCAAGTTTCGAACCCAAACGTGCACAGATGGCGGAAAAAACCCCACATTTAGAGAGAAGTTCATGTTTACGCTGATCGAAGGCCTTAGGGAGCTTAATATCCAGGTGTGGAATAGCAATACACTGAGTGTGGATGATTTTATCGGCAGTGGAAAGGTTCAATTGCACAGGGCACTTTCAACAGGTTTTGATGACTCTTGTTGGCCACTTCAAACCAAAACTGGCAGaaATGCAGGTGAAATAAAACTTATTTTGTATTATCCAGAAGCCAGAAAAGCTTCACCATTTTATGCTCCGTCCGCGCCACCCTACGTGCCACCACCGGGAAATTCTCACGCCCCTCCATATCCTGCACCTGCATCTTCCTATCCACCACCATCCTCTGCACATTATTACCCACCACCACCTCCAGCATCAGTAAATCCTTATTCTTACCCTCCTTCATCTCCCTATCCTTCATATTCATGCGATTACACATCATCACTGTACCCTCCCCCTCCGGCCGCCTATCCTCCCTCTCCATATCCATCAACTTCAGTGTATCCGCAATCTCCATATCCACCTCCACCAGCCTCATCTTATTATCCTCCTGGTCCATATTCCGGAAGCTACCATCATCCACCACCAtattga 753 0.4701 MSITGIHGQLLEVTVVSGYKLKDTEWISRQDPYVCLEYGSTKFRTQTCTDGGKNPTFREKFMFTLIEGLRELNIQVWNSNTLSVDDFIGSGKVQLHRALSTGFDDSCWPLQTKTGRNAGEIKLILYYPEARKASPFYAPSAPPYVPPPGNSHAPPYPAPASSYPPPSSAHYYPPPPPASVNPYSYPPSSPYPSYSCDYTSSLYPPPPAAYPPSPYPSTSVYPQSPYPPPPASSYYPPGPYSGSYHHPPPY 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g0563 250 PRINTS Proline rich extensin signature 133 145 - -
Sto2g0563 250 PRINTS Proline rich extensin signature 152 168 - -
Sto2g0563 250 PRINTS Proline rich extensin signature 175 187 - -
Sto2g0563 250 PRINTS Proline rich extensin signature 207 228 - -
Sto2g0563 250 CDD C2 11 108 - -
Sto2g0563 250 Gene3D C2 domain 9 128 IPR035892 -
Sto2g0563 250 Pfam C2 domain 10 98 IPR000008 -
Sto2g0563 250 SMART C2_3c 10 107 IPR000008 -
Sto2g0563 250 PANTHER CONSERVED SERINE PROLINE-RICH PROTEIN (AFU_ORTHOLOGUE AFUA_2G01790) 4 249 - -
Sto2g0563 250 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 8 127 IPR035892 -
Sto2g0563 250 ProSiteProfiles C2 domain profile. 1 109 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g0563 Sto-Chr2 4784326 4787591 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g0563 10 96 C2H2 Transcription Factor Family AT4G05330 31.034 2.50e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g0563 - - vvi:100241815 238.424
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto2g0563 2 4784326 4787591 Sto2g0563 2 4784326 4787591 ECH