Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g0540 ATGGGCTTTAACTCCAAGAATCTCCATTTGGGGTGGAAAGTTTTGATCTTTAatctcctccttcttctcccaTCATCATTTGCTCTTACCCATGATGGGATTCTCTTGCTTTCCTTCAAATACTCCATCCTCAGCGACCCACTTTCCGTCTTGGAAAACTGGAATTACAGAGACGAAACCCCATGTTCTTGGAACGGAGTCACGTGCACAGAGATTGGAATTACAATGGATAATAGAGTCACAAGCTTGGTTCTTCCAAACAGCCAGCTTTTGGGTTCGATTTCCGAGGATGTTGGAATGATCCAACACCTCAAAATTCTCGATCTTTCCAACAATTTCCTTAATGGGTCTTTacccaattccatcttttccaATTCCTCTGAGCTTCAGGTCCTTTCTCTCGCCAACAATGTCATCTCAGGGGAGATACCTGAATCCATTGGCGAGTCAAAAAGCCTTCAACTTTTGAACCTTTCAGACAATGCCTTTGATGGGTTCGTCCCAAAAAGTCTAACCAATCTGAAAAATCTCACTTTTGTTTCGCTGAGAAGTAATTACTTCTCTGGGAAAATCCCAAGTGGGGTTTTTGACTCTGTTCTGCTTCAGACTCTAGATCTGTCTTCCAATCTCTTCAATGGGTCTCTCCCAGAAGATTTTGATGGGGGTGGGTTGAAATACTTGAACTTTTCTTATAACAAGATTTCAGGAACAATCCCACCTTCATTTGGTAAGAAATTACCTGAAAACGCCATCATTGATCTCTCCTTCAACAATCTCTCTGGTCCAATTCCAATTTCTCTGGCTTTACTTTCCCAGAAAACAGAGTCATTTTCCGGGAATCCTGATCTCTGTGGGAAACCCCTGAAAATCCTCTGCTCCATTCCTTCCACACTATCAAACCCACCCAATTCCACCacttcaccatcatcatcatcatcaccagcaATCGCAGCCATCCCCAAAACAATCGACACAACAAAAAACCCCAACTCCAGTGGGACCCACAATAACCCTCCAAACGGCTTAAAACCCTCCACCATCGCCGGAATCGTCGTCGGAGACCTGGCCGGAGTAGGGATTCTAGCCATAATCATCCTCCTAGTCTACCAACAACGAAAACAACCACACCCAGAAACGAAAAACCCCAAATCATCACCAATCCCCTGTTTCTTCGGGTCGCTAAAAAAAACAGGGGAATCATCGGCATCATCGGAATCGACGAGCTCGGAGGGAGACGATCAAGAGAAGAAGACGAGGGTGGAGatgaaggggaaggaggggaaGTTGGTGACAGTGGACGGAGGCGAGACGAAGATGGAGCTGGAGACTTTGCTGAGGGCGACGGCGTACGTGGTGGGGACGAAGGGAGGGAGCATAGTGTACAGAGCGGTGGTGGAAGATGGGAGAGAGTACGCGGTGAGGAGGATAGGGGTAGGGGAGTGTGTGGTGGAGAGGATGAAGGAATTCGAGAGCCATGTGAGGGGGATTGCGAAGGTTCGGCATCGGAATTTGGTTAGGGTTCGTGGGTTTTGCTGGGGAGAAGATGAGAAGCTTTTGATTTGTGACTATGTTCCTAATGGCAGCCTCGCCAGTATATGTCACAGAAGAACAGGGTCGTCATCATCaacttcatcatcatccccCATGAACAACATGTCCCTAGAGATTCGGGTGAAGATAGCAAGAGGGGTGGCACGTGGGTTAGCCTTCCTCCACGACAAGAAGCACGTGCACGGCAACCTCAAACCCTCCAACATCCTCCTCTCCTCCGACATGGAACCCCTCATCTCCGACTTCGGCCTCCGCCGCCTCCTCCTCCTCACCCACCCCCACACCGCCAACAATTCATTCCGCCAATCAGAAGACGACGCCGCCGGGAGTGGGACCCACCGGTACCACTCGCCGTACCAGGCTCCGGAGTGGTTCCAGCACGTGAAGCCCACCCCGAAGTGCGACGTCTACTCATACGGCGTCGTCTTGCTCGAGCTCCTCACCGGGAGAAGGCTCGACTCCGACCTCGAGTTGTTGTTCgcgggaggaggaggaggatccGACGGTGGCGGCGACGTGGCGGAGGAGAGGCAGAGGGTGATGAGGATGGCTGACGTGGCAATCAGGTGTGGGTGTGACGTGGAGGAGAGAGAAGATGTTGTGTGGCGTTGCTTTGAGTTGGGGTTTAGTTGTGTGTCTCATGTGCCTCACAAGAGACCATCCATGAAAGAGGTTCTACACATCTTGGAGAAGATCCCTTGCTAG 2256 0.4734 MGFNSKNLHLGWKVLIFNLLLLLPSSFALTHDGILLLSFKYSILSDPLSVLENWNYRDETPCSWNGVTCTEIGITMDNRVTSLVLPNSQLLGSISEDVGMIQHLKILDLSNNFLNGSLPNSIFSNSSELQVLSLANNVISGEIPESIGESKSLQLLNLSDNAFDGFVPKSLTNLKNLTFVSLRSNYFSGKIPSGVFDSVLLQTLDLSSNLFNGSLPEDFDGGGLKYLNFSYNKISGTIPPSFGKKLPENAIIDLSFNNLSGPIPISLALLSQKTESFSGNPDLCGKPLKILCSIPSTLSNPPNSTTSPSSSSSPAIAAIPKTIDTTKNPNSSGTHNNPPNGLKPSTIAGIVVGDLAGVGILAIIILLVYQQRKQPHPETKNPKSSPIPCFFGSLKKTGESSASSESTSSEGDDQEKKTRVEMKGKEGKLVTVDGGETKMELETLLRATAYVVGTKGGSIVYRAVVEDGREYAVRRIGVGECVVERMKEFESHVRGIAKVRHRNLVRVRGFCWGEDEKLLICDYVPNGSLASICHRRTGSSSSTSSSSPMNNMSLEIRVKIARGVARGLAFLHDKKHVHGNLKPSNILLSSDMEPLISDFGLRRLLLLTHPHTANNSFRQSEDDAAGSGTHRYHSPYQAPEWFQHVKPTPKCDVYSYGVVLLELLTGRRLDSDLELLFAGGGGGSDGGGDVAEERQRVMRMADVAIRCGCDVEEREDVVWRCFELGFSCVSHVPHKRPSMKEVLHILEKIPC 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g0540 751 Gene3D Ribonuclease Inhibitor 30 198 IPR032675 -
Sto2g0540 751 Gene3D Transferase(Phosphotransferase) domain 1 524 750 - -
Sto2g0540 751 Gene3D Phosphorylase Kinase; domain 1 411 523 - -
Sto2g0540 751 Gene3D Ribonuclease Inhibitor 200 289 IPR032675 -
Sto2g0540 751 Pfam Leucine rich repeat 103 162 IPR001611 GO:0005515
Sto2g0540 751 SUPERFAMILY Protein kinase-like (PK-like) 452 748 IPR011009 -
Sto2g0540 751 SUPERFAMILY L domain-like 32 290 - -
Sto2g0540 751 PANTHER OS04G0122200 PROTEIN 24 750 - -
Sto2g0540 751 Pfam Leucine Rich Repeat 224 243 IPR001611 GO:0005515
Sto2g0540 751 Pfam Protein kinase domain 455 744 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto2g0540 751 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 24 750 - -
Sto2g0540 751 MobiDBLite consensus disorder prediction 396 424 - -
Sto2g0540 751 MobiDBLite consensus disorder prediction 409 424 - -
Sto2g0540 751 Pfam Leucine rich repeat N-terminal domain 31 69 IPR013210 -
Sto2g0540 751 ProSiteProfiles Protein kinase domain profile. 446 747 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g0540 Sto-Chr2 4626643 4629869 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g0540 28 749 Receptor kinase-like Gene Family AT2G15300 50.590 0.0 647
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Sto2g0540 Pkinase 2.8e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g0540 - - aip:107618064 756.518
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto2g0540 2 4626643 4629869 Sto2g0540 2 4626643 4629869 ECH