Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g0529 ATGATTCGTGGGATGGCGGTGCGCAAAGGGAGGCGAAGCGGAGGAGCATGCGTTGGGTGGCGGAACCACGGTTTTCTCGGGGCGGGTGGGGGGTTTGACCATAGAAGCCGAAAACCGAAGCCTTCCTCGGAAAATCCCCATTCACCTCTTTCTCTCTATTCTCTCTACTCTAACCGCACCGTTTCACTCCTCTTTCCCGCTTTCACATGCAACGAGGAGCTTGAGGGGGACCATCCCACCACCTCTTTCTCCCAGTTGTTGTTCGGAGATAATGACGATGTTCTGGACCATTCTGCCCTTCTTCCCTCCTCTCTTTTCTCCAATattgggaatgggaatgggagtaACCCTTACACCTCCAAAATGCTCTGTTTCGGGGATCATCACAACGACGTCGTTTTCGACGAGGCGGAGCAGGAGATTTTGCTTTCTCATACCACCACCAATGCTCCTCTTCTCACTTCCAGTGAATCTTCCTCTGCTTCTAATTCCTCCTCCaacaataatactaataataataatgtattttCCTCCTTTTCTCACAAAAAGCGGAATGGGTCGGGGCTGGAACCGCTGAAGTCTACGGGAGCCGTCGTCGCGGCGGCGAGTGGTGGCCGCCGACAATCTAAGAAGACCAAAGCCGACAACCCCGGTTCTACTTCCGGACATGCAAAGAAGAAGGAGAAATTAGGGGAACGAATTGCAGCATTACAACAGCTGGTTTCTCCCTTTGGGAAGACAGATACAGCTTCGGTGCTGCACGAGGCAATGGGGTACATAAGGTTTCTTCATGACCAAGTTCAGGTTCTGTGCTCGCCATATCTGCAACGCCTGCCTTCTTCCTCAttccaccatcatcatcaccttCCTGGGGATgcagaagaagacaagagagaCTTGAGGAGCAGAGGATTGTGTCTGATCCCAGTGGAATCCACCGTACACGTGGCCAGCAGCAACGGTGCTGATTTCTGGTCACCTGCTATGGCTACTCATACTACTACTAAGTACTAA 1014 0.4793 MIRGMAVRKGRRSGGACVGWRNHGFLGAGGGFDHRSRKPKPSSENPHSPLSLYSLYSNRTVSLLFPAFTCNEELEGDHPTTSFSQLLFGDNDDVLDHSALLPSSLFSNIGNGNGSNPYTSKMLCFGDHHNDVVFDEAEQEILLSHTTTNAPLLTSSESSSASNSSSNNNTNNNNVFSSFSHKKRNGSGLEPLKSTGAVVAAASGGRRQSKKTKADNPGSTSGHAKKKEKLGERIAALQQLVSPFGKTDTASVLHEAMGYIRFLHDQVQVLCSPYLQRLPSSSFHHHHHLPGDAEEDKRDLRSRGLCLIPVESTVHVASSNGADFWSPAMATHTTTKY 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g0529 337 MobiDBLite consensus disorder prediction 152 228 - -
Sto2g0529 337 CDD bHLH_AtbHLH_like 225 270 IPR045239 -
Sto2g0529 337 PANTHER BASIC HELIX-LOOP-HELIX (BHLH) DNA-BINDING SUPERFAMILY PROTEIN-RELATED 138 320 - -
Sto2g0529 337 MobiDBLite consensus disorder prediction 152 184 - -
Sto2g0529 337 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 138 320 - -
Sto2g0529 337 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 226 275 IPR036638 GO:0046983
Sto2g0529 337 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 214 263 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g0529 Sto-Chr2 4541855 4545358 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g0529 225 328 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31730 55.769 3.42e-36 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g0529 - - gmx:100809317 221.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto2g0529 2 4541855 4545358 Sto2g0529 2 4541855 4545358 ECH