Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g0516 ATGGTTGAAGAATCGGTAGCGAGTAAGGAATATGACGCGCTTGAGCATGGTCAAACTGGGGAAGATTCCGTTGAGTCGATCCCATTTCAGGTGGTTTCGTTATCTGTTCTCCGTTTTGCTTTTGATGCTAAAACAGTTATTCTAATCAAGTTTTCATATCTTGACATTGTTCAAAAGATAATAGAGCTTAAGGTTTTAAGTTGGAGGCCAAGAGCAGTCTACTTTCCAAATTTCACAAGTCCGGAGGTATGTGAACACATAATTGAAATGGCAAAGTCTAAACTTCAACCATCAAAATTAGCTTTGCGAAGAGGAGAATCTGCTGAGAGCACAAAGGGCACTAGAACAAGCATTGCAAACATTAGTGATTTGATTGAGTTGCTCAGATCTCTTCATGAACACAGTATATTCAATGCCTGTTGCTCAGGCACATTCATCAGTGCATCACAAGATAAAACTGGCTTCTTAGACTTGATTGAGAGGAAAATAGCTAGGGTAACAATGATACCAAGGAACCATGGGGAGTCATTCAATGTATTGCGGTATGAGATTGGCCAAAAATATGATGCTCATTATGATGCGTTCAACCCAGCTGAATATGGTCCTCAACAGAGCCAAAGGGTTGCTTCCTTCTTGTTGTACCTGTCAAATGTTGAAGCAGGAGGAGAAACCATGTTTCCTTACGAGGATGGTATGAATATTGGTACACTTTATGATTACAAAAAATGCATTGGTTTGAAGGTGAAGCCGCGTCAAGGTGATGgactattattttattctttgctTCCAAATGGCACAATTGATCAGGAATGCAATTACAGTGAAATTAATCTTGCTGCAGATTTTCAGACAAGTGTGCATGGTGCTTCTGTGAGTGTAAATATGGTTGATGCCTTGCATGAAGTGCAACAAAGAGATGGTAGGCTGCTTGTTTCTCCTAAACCGGATGCTGCATTGTTTGAAGGGGACCGAGATATAGAGCCACACAATGGCATTGAATTTGACTCTCATGAGTTAGCTTATTCATTTTATCAAGAATATGCCAAATCTATGGGATTCACCACTTCAATAAAAAACAGCAGACGTTCAAAGAAGACAAAAGAATTTATTGATGCCAAATTTGCGTGTTCTAGGTATGGAGTTACTCCTGAGTCTGATAGTGGAAGCAGTCGAAGACCAAGTGTAAAGAAGACCGATTGCAAAGCATGCATGCACGTGAAGAGAAGGCCTGATGGAAAGTGGATCATTCATGAATTCATAAAGGAACATAATCATGAACTTTTACCAGCTTTGGCGTATCATTTTCGGATTCATAGGAATGTGAAATTAGCTGAAAAGAATAATATTGATATTTTGCATGCTGTTAGCGAACGCACCAGAAAGATGTATGTTGAAATGTCTAGACAATCTGGTGGCTGTGTTAATATAGGATCTCTCCAGGATGATATAAATTACCAATCTGATAGAGGCCAGTATTTGGCTCTAGATGAGGGAGATGCCCAAGTTATGCTCGAGTATTTTAAGCGCATTCAAAAGGATAACCCTAACTTCTTCTATGCTATAGATTTGAATGAAGAGCTACGTCTGAGAAATCTTTTTTGGGTTGATGCAAAAAGTAGGAATGATTATCTCAGCTTTAATGATGTAGTTTCATTTGATACTACTTACATCAAAACAAATGATAAGCTACCTTTTGCTCCTTTTGTTGGAGTAAACCATCACTCTCAACCCATATTGCTGGGATGTGCATTGATTGCGGATGAGAGCAAAGCAACATTTGTTTGGTTAATGAAGACATGGCTTCGAGCAATGGGTGGACAAGCTCCCAAAGTCATAATCACTGATCAAGACAAAACCTTAAAGGCATCCATTGAAGAAGTCTTCCCAAATGTACGCCATTGTTTTTCTCTTTGGCATGTACTGGAAAGGATACCTGAAAATCTTTCTTCTGTGATCAAACAGTACAAGAATTTCTTGCCAAAGTTTAACAAGTGCATTTTCAAGTCTTGGACAGATGAACAGTTTGACATGAGGTGGTGGAAAATGGTCACTAGATTTGAACTCCAAGATGATGTATGGTTTCAGTCATTGTATGAGGACCGGAAAAAGTGGGTGCCTACTTACATGGGGGATACCTTTTTAGCTGGAATGTCTACACCTCAACGTTCTGAAAGCATTAACTCTTTCTTTGACAAATACATTCATAAGAAAATCACCCTTAGAGAGTTAGTAAGGCAATATGGTACAATTCTTCAGAATAGGTATGAAGAGGAAGCCATTGCAGATTTTGATACATTGCACAAGCAACCGGCACTTAAGTCCCCTTCACCTTGGGAAAAACAAATGTCAACAGTTTATACACATGCAATATTCAAGAAATTCCAAGTTGAAGTCCTGGGAGTAGCTGGCTGTCATTTtaggagagagggtggagaTGGAACTATAGCAAAATTTATAGTTCAGGATTATGAGAAGAATGAAGAATTTTTGGTAACTTGGAATGAGATGAACTCAGAGGTCTCTTGCTTCTGTCGGTTGTTTGAATACAAGGGTTTCCTTTGCAGGCATGCACTGAATGTTCTACAACTTTGTGGTTGTTCAAGTATTCCATCTCATTATATCTTGAAGAGATGGACCAAGGATGCCAAAAGTAGGGAATCAATGACAGATGGGACTGAAAAGATACAAACTAGAGTGCAACGATATAATGACTTATGTAAACGAGCTATTGAGTTGAGTGAAGAAGGATCATTATCTGAAGACAATTACAACGTTGTTTTCCGTACACTTGTTGATGCCCTCAAGAACTGTGTACATGTTAATAATTCTAACTATGGTGCAGAAACTAGCAACAATTATGGCCTTCGTGATGCAGAAGAAGAAAACCAGGGCAGCAATGCTTTAAAACCAACTAAAAAGAGGAACATAGCTAGGAAAAGAAAGGTACAATTGGAGCCGGATGTTATACTTGTTGATGCACAAGACAGCCTCCAGCAAATGGACAATCTGAGTGCCGATGCAATAACCCTCAATGGATATTATGGTGCTCAGCCGAATGTGCAAGGACTgGTACAGCTGAACTTGATGGAGCCACCTCATGATGGTTACTATGTTAATCAACAGAGCATGCAGGGCCTGggCCCATTGAACTCTATGGCACCGAACCACGATGGCTTTTTCGGAACACAGCAAACAATTCATGGATTGGTAgaGGGGGGCAACTGGAATTTCGTCCAGCTACTACTTTTGGATACACCCTGCAGATGGCCAATTCCACATGTCTCAGGAGAAGAATATCGTCTTCTAGGAAATGCTCTGAATGCCCTGAGAAGCAGGCTTTCTGACCCCAACAACGTGCTTCAGAGCTGGGACCCAACTCTGGTGAATCCTTGTACTTGGTTCCATGTTACCTGCGACTCCAACAATCATGTCACTCGCCTAGATTTGGGTAATTCCAACATTTCTGGAACTCTAGGCCCAGAAATTGGTCAGCTGCAGCATTTGCAATACTTGGAGCTTTACATGAACAACCTAAGAGGGAAGATTCCTAGGGAATTTGGTAACTTGAAAAAGCTTGTAAGCATGGATTTGTATGGTAACAAGTTTGAAGGGGAAATCCCAAAGTCATTTGGCAAGTTGAAGTCACTTAGATTCCTGCGACTGTACAACAACAAGCTTTCAGGACCAATCCCAAGGCAACTCACTGCTCTCACCAACCTCAAAGTCTTTGATGTTTCTAACAACAACCTCTGTGGAACAATACCAGTAGATGGCCCCTTTGTTTCCTTCCCTATGGAAAGCTTTGAAAAGAACAGTAAACTCAATGGCCCAGAGCTGAAAGGACTGGTTCCTTATGATTTTGGATGCTGA 3870 0.4 MVEESVASKEYDALEHGQTGEDSVESIPFQVVSLSVLRFAFDAKTVILIKFSYLDIVQKIIELKVLSWRPRAVYFPNFTSPEVCEHIIEMAKSKLQPSKLALRRGESAESTKGTRTSIANISDLIELLRSLHEHSIFNACCSGTFISASQDKTGFLDLIERKIARVTMIPRNHGESFNVLRYEIGQKYDAHYDAFNPAEYGPQQSQRVASFLLYLSNVEAGGETMFPYEDGMNIGTLYDYKKCIGLKVKPRQGDGLLFYSLLPNGTIDQECNYSEINLAADFQTSVHGASVSVNMVDALHEVQQRDGRLLVSPKPDAALFEGDRDIEPHNGIEFDSHELAYSFYQEYAKSMGFTTSIKNSRRSKKTKEFIDAKFACSRYGVTPESDSGSSRRPSVKKTDCKACMHVKRRPDGKWIIHEFIKEHNHELLPALAYHFRIHRNVKLAEKNNIDILHAVSERTRKMYVEMSRQSGGCVNIGSLQDDINYQSDRGQYLALDEGDAQVMLEYFKRIQKDNPNFFYAIDLNEELRLRNLFWVDAKSRNDYLSFNDVVSFDTTYIKTNDKLPFAPFVGVNHHSQPILLGCALIADESKATFVWLMKTWLRAMGGQAPKVIITDQDKTLKASIEEVFPNVRHCFSLWHVLERIPENLSSVIKQYKNFLPKFNKCIFKSWTDEQFDMRWWKMVTRFELQDDVWFQSLYEDRKKWVPTYMGDTFLAGMSTPQRSESINSFFDKYIHKKITLRELVRQYGTILQNRYEEEAIADFDTLHKQPALKSPSPWEKQMSTVYTHAIFKKFQVEVLGVAGCHFRREGGDGTIAKFIVQDYEKNEEFLVTWNEMNSEVSCFCRLFEYKGFLCRHALNVLQLCGCSSIPSHYILKRWTKDAKSRESMTDGTEKIQTRVQRYNDLCKRAIELSEEGSLSEDNYNVVFRTLVDALKNCVHVNNSNYGAETSNNYGLRDAEEENQGSNALKPTKKRNIARKRKVQLEPDVILVDAQDSLQQMDNLSADAITLNGYYGAQPNVQGLVQLNLMEPPHDGYYVNQQSMQGLGPLNSMAPNHDGFFGTQQTIHGLVEGGNWNFVQLLLLDTPCRWPIPHVSGEEYRLLGNALNALRSRLSDPNNVLQSWDPTLVNPCTWFHVTCDSNNHVTRLDLGNSNISGTLGPEIGQLQHLQYLELYMNNLRGKIPREFGNLKKLVSMDLYGNKFEGEIPKSFGKLKSLRFLRLYNNKLSGPIPRQLTALTNLKVFDVSNNNLCGTIPVDGPFVSFPMESFEKNSKLNGPELKGLVPYDFGC 1289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g0516 1289 SMART p4hc 70 283 IPR006620 GO:0005506|GO:0016705|GO:0031418
Sto2g0516 1289 Pfam FAR1 DNA-binding domain 342 429 IPR004330 -
Sto2g0516 1289 Pfam Leucine rich repeat N-terminal domain 1104 1139 IPR013210 -
Sto2g0516 1289 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 297 1016 IPR031052 GO:0006355
Sto2g0516 1289 Pfam 2OG-Fe(II) oxygenase superfamily 178 261 IPR044862 -
Sto2g0516 1289 Pfam SWIM zinc finger 838 864 IPR007527 GO:0008270
Sto2g0516 1289 SUPERFAMILY L domain-like 1105 1258 - -
Sto2g0516 1289 SMART 26again6 840 867 IPR006564 GO:0008270
Sto2g0516 1289 Gene3D q2cbj1_9rhob like domain 63 276 - -
Sto2g0516 1289 ProSiteProfiles Zinc finger SWIM-type profile. 829 865 IPR007527 GO:0008270
Sto2g0516 1289 Pfam Leucine rich repeat 1143 1202 IPR001611 GO:0005515
Sto2g0516 1289 Gene3D Ribonuclease Inhibitor 1103 1283 IPR032675 -
Sto2g0516 1289 Pfam MULE transposase domain 549 642 IPR018289 -
Sto2g0516 1289 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 173 322 IPR005123 -
Sto2g0516 1289 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 297 1016 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g0516 Sto-Chr2 4423794 4439419 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g0516 1103 1277 Receptor kinase-like Gene Family AT1G34210 60.571 5.81e-63 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sto2g0516 MULE 6.9e-25 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g0516 - - lang:109346405 1402.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto2g0516 2 4423794 4439419 Sto2g0516 2 4423794 4439419 ECH