Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g0510 ATGCTCCGGCATTGCCTTGAGGGCATACAAAGCCCAGAGGCCCAAGCCCACGCCACTGTCTTCGTTGCCAAGTTCTTCGGCCGCGCCGCCCTCATGTCCTTCCTCTCCTCCGTTCACACCCACCAGAGACccgCATTGTTTAGATCACTTTTGTACGAAGCAGTAGGACGTACCATAAATCCGGTGAACGGAGCCGTGGGCCTACTCTGGGCCGGAAACTGGCACCTCTGCCAATTAGGAGTCGACAAAGTGCTCCGCGGCGGCGCGTTGACTCCACTCCCTCGCTTCTCCTCCGGATCTTCGGTTCCGGCGCCGGAAGGCTTCGGATCTGTTCTAGATGATGCCGGTTCCGGAACAAGAAGGTTGAAGAGGAAGGTTGGGGGCGGCGACGACGTCGTCGTAGCGGAGAATTTTCAAGCAGACGATGATCGCGAGGGCTTCTTATTAGGGAGATCGGATTCGCCGGAGAAACTGGTGGTCGGCGTCGGCGGGAGGATTTACAGAGCCAAGGATGATCGGCGATCGGCGACTCCGTCGGAGGAATCCGAAACGTCGACGTTGGGAAGTAGCGCCGGGCACGGCGGTAGTAATGAAAGGAAGCTCCTAAGGCTTTTCTTCTAG 621 0.5765 MLRHCLEGIQSPEAQAHATVFVAKFFGRAALMSFLSSVHTHQRPALFRSLLYEAVGRTINPVNGAVGLLWAGNWHLCQLGVDKVLRGGALTPLPRFSSGSSVPAPEGFGSVLDDAGSGTRRLKRKVGGGDDVVVAENFQADDDREGFLLGRSDSPEKLVVGVGGRIYRAKDDRRSATPSEESETSTLGSSAGHGGSNERKLLRLFF 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g0510 206 MobiDBLite consensus disorder prediction 169 199 - -
Sto2g0510 206 Pfam Lateral organ boundaries (LOB) domain 8 81 IPR004883 -
Sto2g0510 206 PANTHER LOB DOMAIN-CONTAINING PROTEIN 1 205 - -
Sto2g0510 206 ProSiteProfiles LOB domain profile. 1 90 IPR004883 -
Sto2g0510 206 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g0510 Sto-Chr2 4384070 4385905 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g0510 1 117 AS2 family AT3G49940 62.393 1.33e-46 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Sto2g0510 LOB 1.6e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g0510 - - lja:Lj5g3v2099760.1 181.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto2g0510 2 4384070 4385905 Sto2g0510 2 4384070 4385905 ECH
Sto9g3501 9 34248945 34249595 Sto2g0510 2 4384070 4385905 ECH