Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g0458 TTGGCAGGCGGCGGCGTTGACGTCGCCGCGGCAGAGGAAGAGCCCGGAGACGGCGTCGGGAGTGTACTGAGCGATGGTGGTTCTGTAGAAGCCATTATTAGGAAGGGAGGCGTTGGAGCTGACCCAACTTACCTTGACCACGACTGCTCTACCCACAACTTCACTGCCAATAGTCCCTTCCAATTGGACCGAACCACCCTCCTCTCTTCCTTAGCTTCCAACGCCACCGGCAACACCCACTTCTACAACGCCACCGCCGACACCGCCTACGGCCTCTTCATGTGCCGCGGCGACGTCAACCGTACGGACTGCCACCAATGCGTCGTCAACGCGACCCAGCGCATATCCGCCGAGTGCCGATCCTCCAAGGAGGCTGTAATCTGGTACGACGAGTGCATGCTTCGCTATTCCAACCGCTCCTTCTTCTCCACCGTCGATACGAATCCTAATGTCGGCCTCTTGAACACCGGCAACGTCTCGGATCAAACGAATTTCATGAGTTTGTTGTTCAAAACGATAAACGAAACGGCGGATGAGGCGGCGAAAGGTGATTTGGGGGAAAAGAAGTATGCGACGAAGGAAGCGAATATTTCGGGGTTTCAGTCTCTGTATTGTCTTGCTCAGTGCACGGCGGACCTTTCGGCTGAAGATTGCAGAAGGTGTCTGAGTGGTGTGATTGGGGATTTCAACTGGTGTTGTACGGGAAAGCAAGGAGGAAGAGTCTTGTACCCTAGTTGTAATGCTCGCTATGAATTGTACCCTTTCTATCATACTGAGACTCCACCGACTACTCCTACACCACCTGCGATTCTTCCTCCTGCTAATTCTGCAGGTTCCCGAGCAAAGAGTGGGATCTCATCGGGTACGATTGTTGCAATTGTGGTTCCAATTTCAGTGGCTGTGCTGCTGTTTATAGTAGGTGTTATTTTCCtgagcagaagaagaagaaagaaatatgaCTCTGCACCAGAAGGAAAATCTGCAAGTGAAATCACCACTGTGGAATCACTGCAATTCGATTTTGGTACCATTGAAGCAGCCACAAACAAGTTCTCTGCAGAAAACAAGCTAGGTGAAGGTGGATTTGGAGAGGTTTATAAGGGAACTCTTCAAAGTGGACAAGAAATTGCTGTCAAGAGACTCTCACAAGGCTCTGGACAAGGTGCACTAGAATTTAAGAATGAAGTGGTAGTTGTTGCCAAGCTTCAACACAGAAATTTAGTGAGGCTTTCGGGATTTTGCTTGCAAGGAGAAGAGAAGATTCTTGTTTATGAATATGTCCCCAACAAAAGTCTTGATTACATCCTCTTTGACCCTGAAAAACAAAGACAGTTGGATTGGACAAAGCGATACAAGATTATTGGAGGGATTGCTCGAGGAATTCAATATCTTCATGAAGATTCTAGGCCTAGAATTATTCACCGGGATCTTAAAGCTAGCAACGTATTGTTGGACGGTGATATGAATCCGAAGATTTCAGATTTTGGCATGGCAAAGATATTCGGAGTTGATCAAACTCATGGAAATACTAGTCGAATTGCTTGGAAACTTTGGAAGGATGGAGAACCCTTGGAATTATTGGACCCCACATTAAGAGAATCCTATACACCAAATGAAGTTATGAGATGTATCCACATTGGGTTACTATGTGTTCAAGAAGACCCAGAAGAAAGACCTACCATGGCATCCATAGTTCTCATGCTTGATAGTTATTCTGTGACTCTGCCAACACCTACACAACCTGCATTTTTTTCAAACATGCCGAAGGATTTCCAGTTCGATCAATCTGCGAGCAAATTGCCGCCAATGTCCGTCAACGAGATGTCGATTAGCGACACGATTCCTCGATAA 1851 0.4662 LAGGGVDVAAAEEEPGDGVGSVLSDGGSVEAIIRKGGVGADPTYLDHDCSTHNFTANSPFQLDRTTLLSSLASNATGNTHFYNATADTAYGLFMCRGDVNRTDCHQCVVNATQRISAECRSSKEAVIWYDECMLRYSNRSFFSTVDTNPNVGLLNTGNVSDQTNFMSLLFKTINETADEAAKGDLGEKKYATKEANISGFQSLYCLAQCTADLSAEDCRRCLSGVIGDFNWCCTGKQGGRVLYPSCNARYELYPFYHTETPPTTPTPPAILPPANSAGSRAKSGISSGTIVAIVVPISVAVLLFIVGVIFLSRRRRKKYDSAPEGKSASEITTVESLQFDFGTIEAATNKFSAENKLGEGGFGEVYKGTLQSGQEIAVKRLSQGSGQGALEFKNEVVVVAKLQHRNLVRLSGFCLQGEEKILVYEYVPNKSLDYILFDPEKQRQLDWTKRYKIIGGIARGIQYLHEDSRPRIIHRDLKASNVLLDGDMNPKISDFGMAKIFGVDQTHGNTSRIAWKLWKDGEPLELLDPTLRESYTPNEVMRCIHIGLLCVQEDPEERPTMASIVLMLDSYSVTLPTPTQPAFFSNMPKDFQFDQSASKLPPMSVNEMSISDTIPR 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g0458 616 ProSiteProfiles Protein kinase domain profile. 351 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto2g0458 616 Gene3D Transferase(Phosphotransferase) domain 1 510 576 - -
Sto2g0458 616 Gene3D Transferase(Phosphotransferase) domain 1 427 509 - -
Sto2g0458 616 MobiDBLite consensus disorder prediction 1 22 - -
Sto2g0458 616 ProSitePatterns Protein kinases ATP-binding region signature. 357 379 IPR017441 GO:0005524
Sto2g0458 616 ProSiteProfiles Gnk2-homologous domain profile. 42 141 IPR002902 -
Sto2g0458 616 SMART serkin_6 351 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto2g0458 616 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 514 614 - -
Sto2g0458 616 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 49 513 - -
Sto2g0458 616 ProSitePatterns Serine/Threonine protein kinases active-site signature. 472 484 IPR008271 GO:0004672|GO:0006468
Sto2g0458 616 ProSiteProfiles Gnk2-homologous domain profile. 147 255 IPR002902 -
Sto2g0458 616 Gene3D Phosphorylase Kinase; domain 1 313 426 - -
Sto2g0458 616 Pfam Protein tyrosine and serine/threonine kinase 353 505 IPR001245 GO:0004672|GO:0006468
Sto2g0458 616 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 49 513 - -
Sto2g0458 616 Pfam Salt stress response/antifungal 49 138 IPR002902 -
Sto2g0458 616 Pfam Salt stress response/antifungal 158 253 IPR002902 -
Sto2g0458 616 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 514 614 - -
Sto2g0458 616 MobiDBLite consensus disorder prediction 596 616 - -
Sto2g0458 616 Gene3D - 150 255 IPR038408 -
Sto2g0458 616 Gene3D - 41 141 IPR038408 -
Sto2g0458 616 SUPERFAMILY Protein kinase-like (PK-like) 336 597 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g0458 Sto-Chr2 3952434 3958492 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g0458 38 616 Receptor kinase-like Gene Family AT4G05200 47.041 0.0 556
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Sto2g0458 PK_Tyr_Ser-Thr 2.9e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g0458 - - gmx:100305391 771.926
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto2g0458 2 3952434 3958492 Sto2g0458 2 3952434 3958492 ECH