Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g0456 ATGTCCATTCTCATGCCTTCCTCCaaattctccttcttcttcttcttcttcttcatcaactTCCTCAATTCTGCTACTAATATTGCATCAGCTGACCCAACTTACCTTTACCACAACTGCTCTATCCACAAAAACTTCACTGCCAATAGTCCCTTCCAATTGGACCGAACCACCCTCCTCTCTTCCTTAGCTTCCAACGCCACCGGAAACACCGACTTCTACAACGCCACCGCCGGCGCCGGCGCCGACGCCGCCTACGGCCTCTTCATGTGCCGCGGCGACGTCAACAGTACGGACTGCCGCCAATGCGTCGTCAACGCGACCCAGCGCATATCCGCCGAGTGCCGATCCTCGAAGGAGGCTGTAATCTGGTACGACGAGTGCATGCTCCGCTATTCCAACCGCTCCTTCTTCTCCACCGTCGATACGAGGCCCAGGGTGGGCCTCCTGAACACCGGCAACGTCTCGGATCAGACGAATTTCATGAGTTTGTTGTTCAAGACGATAAACGAAACGGCGGATGAGGCGGCGAAAGGTGATTTGGGGGAAAAGAAGTATGCGACGAAGGAAGCGAATATTTCGGGGTTTCAGTCTCTGTATTGTCTTGCTCAGTGCACGGCGGACCTTTCGGCTGAAGATTGCAGAAGGTGTCTGAGTGGTGTGATTGGGGATTTCAACTGGTGTTGTACGGGAAAGCAAGGAGGAAGAGTCTTGTACCCTAGTTGTAATGCTCGCTATGAATTGTACCCTTTCTATCATACTGAAGCACCAGCGACTACTCCTACACCACCTGCCATTGTTCCTCCTGCTAATTCTGCAGGTTCGCGAGGAAAGAGTGGGATCTCATCGGGTACGATTGTTGCAATTGTGGTTCCAATATCAGTGGCTGTGCTGCTGTTTATAGTAGGTGTTTGTTTCTTGACCAGAAGAACAAGAAAGAAATATGACTCTGCACCAGAAGGAAAATCTGCAAGTGAAATCACCACTGTGGAATCACTGCAAATCGATTTCGGTACCATTGAAGCAGCCACAGACAAATTCTCTGCAGAAAACAAGCTAGGTGAAGGTGGATTTGGAGAGGTTTATAAGGGAACTCTTCAAAGTGGACAAGAAATTGCTGTCAAGAGACTCTCACAAGGCTCTGGACAAGGTGCACTAGAATTTAAGAATGAAGTGGTAGTTGTTGCCAAGCTTCAACACAGAAATTTAGTGAGGCTTTTGGGATTTTGCTTGCAAGGAGAAGAGAAGATTCTTGTTTATGAATATGTCCCCAACAAAAGTCTTGATTACATTCTCTTTGACCCTGAAAAACAAAGACAGTTGGATTGGACAAAGCGTTACAAGATTATCGGAGGGATTGCTCGAGGAATTCAATATCTTCATGAAGATTCTAGGCCTAGAATTATTCACCGGGATCTTAAAGCTAGCAACGTATTGTTGGACGGTGATATGAATCCGAAGATTTCAGATTTTGGCATGGCAAAGATATTCGGAGTTGATCAAACTCAAGGAAATACCAGTCGAATTGCTTGGAAACTTTGGAAGGATGGAGAACCCTTGGAACTATTGGACCCCACATTAAGAGAATCCTATACACCAAATGAAGTTATGAGATGTATCCACATTGGGTTACTATGTGTTCAAGAAGACCCAGCAGAAAGACCTACCATGGCATCCATAGTTCTCATGCTTGATAGTTATTCTGTGACTCTACCAACACCTACACAACCTGCATTTTTTATCCAAAGTAGAACTGATTCGAGCATGCCAAAGGATTTCCTGTTCGATCAATCTGCGACCAAATCGCCCCCAATGTCCGTCAATGAGATGTCGATTAGCGACATGATTCCTCGTTCTCATGCTTGTACAGTTTCCATCACTTACAAACCAAACACAACTTTTCAAACCAACCTCAACTCCCTCCTCTCCTCACTCTCTTCCAATGCCACAAATGGTATCCATTATTTTCGTACAACAATCGCCGGCGGCACCCCAAGCGTCGTCAACGGCCTCTTCCTCTGCCGCGGCGACACCCTCGCCGCCGCATGCCACGAGTGCGTCTCCGCCGCCGCCGGAGACCTGAAGCGCCGGTGTCCCTCCCAAAAGGAGGCCATAATCTGGTACGACGTGTGTATGCTGCGATACTCCAACCAATCTTTCAACAACATCGTACCTTCGACGGGCCTGTCGGCTTCCGACGCCGTAGCTCCGGCGGAATATGGCCGGTTCAATGAATTGCTGGCCGGAATGTTAAATTCTCTGGCGGCGAGAGTTGTGAATTCCGAGAAGGCGAAGTTTGCGACGGCGGAAGTGAATTTCACAAGAACGGAGACTCTGTTCGGATTAGTACAGTGCACGCCGGAGTTGTCGGTGTTTGATTGTAATATGTGTTTCAGAAGTGCTATAGCGGCGGTTCCTAATTGTTGCGACGGAAAACGAGGAGCGAGAGTGTTGCTTCCTAGTTGTAACATCAGATATGAACTATACCCATTCTTCAATTCAACCCAAATATATACTCCTCCGATCATTCAACCTCGTCCTTCAGGAAGGAGCCATGTTTCAATAATTCTTGGATTCGTTATCCCAATTCTTGCTGCGATGGTGCTTTTCGTGTTTGGATTCTGTTCTTTCATGGGAAAACAAGCAAGAAATATGATAATGTTTTGGAAGAAAAGGGTGAGATAA 2685 0.4674 MSILMPSSKFSFFFFFFFINFLNSATNIASADPTYLYHNCSIHKNFTANSPFQLDRTTLLSSLASNATGNTDFYNATAGAGADAAYGLFMCRGDVNSTDCRQCVVNATQRISAECRSSKEAVIWYDECMLRYSNRSFFSTVDTRPRVGLLNTGNVSDQTNFMSLLFKTINETADEAAKGDLGEKKYATKEANISGFQSLYCLAQCTADLSAEDCRRCLSGVIGDFNWCCTGKQGGRVLYPSCNARYELYPFYHTEAPATTPTPPAIVPPANSAGSRGKSGISSGTIVAIVVPISVAVLLFIVGVCFLTRRTRKKYDSAPEGKSASEITTVESLQIDFGTIEAATDKFSAENKLGEGGFGEVYKGTLQSGQEIAVKRLSQGSGQGALEFKNEVVVVAKLQHRNLVRLLGFCLQGEEKILVYEYVPNKSLDYILFDPEKQRQLDWTKRYKIIGGIARGIQYLHEDSRPRIIHRDLKASNVLLDGDMNPKISDFGMAKIFGVDQTQGNTSRIAWKLWKDGEPLELLDPTLRESYTPNEVMRCIHIGLLCVQEDPAERPTMASIVLMLDSYSVTLPTPTQPAFFIQSRTDSSMPKDFLFDQSATKSPPMSVNEMSISDMIPRSHACTVSITYKPNTTFQTNLNSLLSSLSSNATNGIHYFRTTIAGGTPSVVNGLFLCRGDTLAAACHECVSAAAGDLKRRCPSQKEAIIWYDVCMLRYSNQSFNNIVPSTGLSASDAVAPAEYGRFNELLAGMLNSLAARVVNSEKAKFATAEVNFTRTETLFGLVQCTPELSVFDCNMCFRSAIAAVPNCCDGKRGARVLLPSCNIRYELYPFFNSTQIYTPPIIQPRPSGRSHVSIILGFVIPILAAMVLFVFGFCSFMGKQARNMIMFWKKRVR 894
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g0456 894 SMART serkin_6 347 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto2g0456 894 ProSiteProfiles Gnk2-homologous domain profile. 725 831 IPR002902 -
Sto2g0456 894 ProSitePatterns Serine/Threonine protein kinases active-site signature. 468 480 IPR008271 GO:0004672|GO:0006468
Sto2g0456 894 Gene3D Transferase(Phosphotransferase) domain 1 504 571 - -
Sto2g0456 894 Pfam Salt stress response/antifungal 622 718 IPR002902 -
Sto2g0456 894 Pfam Salt stress response/antifungal 154 249 IPR002902 -
Sto2g0456 894 Pfam Salt stress response/antifungal 741 829 IPR002902 -
Sto2g0456 894 Pfam Salt stress response/antifungal 40 134 IPR002902 -
Sto2g0456 894 ProSiteProfiles Gnk2-homologous domain profile. 143 251 IPR002902 -
Sto2g0456 894 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 626 875 - -
Sto2g0456 894 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 510 616 - -
Sto2g0456 894 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 7 509 - -
Sto2g0456 894 ProSiteProfiles Gnk2-homologous domain profile. 616 720 IPR002902 -
Sto2g0456 894 Gene3D Transferase(Phosphotransferase) domain 1 423 503 - -
Sto2g0456 894 SUPERFAMILY Protein kinase-like (PK-like) 334 587 IPR011009 -
Sto2g0456 894 ProSitePatterns Protein kinases ATP-binding region signature. 353 375 IPR017441 GO:0005524
Sto2g0456 894 ProSiteProfiles Protein kinase domain profile. 347 657 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto2g0456 894 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 626 875 - -
Sto2g0456 894 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 7 509 - -
Sto2g0456 894 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 510 616 - -
Sto2g0456 894 Gene3D Phosphorylase Kinase; domain 1 309 422 - -
Sto2g0456 894 Gene3D - 731 831 IPR038408 -
Sto2g0456 894 Gene3D - 32 137 IPR038408 -
Sto2g0456 894 Gene3D - 146 251 IPR038408 -
Sto2g0456 894 Gene3D - 618 720 IPR038408 -
Sto2g0456 894 ProSiteProfiles Gnk2-homologous domain profile. 34 137 IPR002902 -
Sto2g0456 894 Pfam Protein tyrosine and serine/threonine kinase 349 501 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g0456 Sto-Chr2 3934097 3941306 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g0456 620 886 Receptor kinase-like Gene Family AT4G05200 37.762 2.33e-53 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Sto2g0456 PK_Tyr_Ser-Thr 1.6e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g0456 - - lang:109353867 869.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto2g0456 2 3934097 3941306 Sto2g0456 2 3934097 3941306 ECH