Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g0455 ATGACGACGATGGAGTCACTGCAATTTAATTTTAGTACAATCGAAGCGGCCACAAACAAGTTCTCTTTAGATAACAAGCTAGGTGAAGGTGGATTTGGAGAAGTGTACAAGGGAATACTTTCAAGTGGACAAGAAATAGCTGTCAAGAGACTCTCCCAAAGCTCGGGACAAGGAAGTGAAGAATTTAAGAACGAAGTAGTGGTCGTTGCCAAGCTTCAACATCGGCATTTAGTGAGACTTCTTGGATTTTGCTTGGAAGGAGAAGAGAAGATTCTTGTTTATGAATATGTGCCTAACAAAAGCCTAGACTATATTCTTTTTGACCCAGAAAGGCAAAGAGAGTTGGACTGGACAAGACGTTACAAGATTATCGCAGGGGTTGCTCGAGGAATTCAATATCTTCACGAAGATTCAAGGCTTAGAATTATACATCGCGACCTTAAAGCTAGCAATGTCTTGTTAGATGGCGATATGAATCCAAAAATCTCGGATTTTGGCATGGCACGAATTTTCGGAGTCGATCAAACTCGAGGAAATACAAGTCATATTGTTGGGACATACGGTTACATGTCTCCGGAATATGCAATGCACGGAGAGTTTTCAATTAAGTCTGATGTATATAGCTTCGGTGTTCTACTTATGGAGATTATAAGTGGCAAGAAGAATAGCTCTTTCTATCAAACAGGTGGTGCTGAGGATCTTTTGAGCTATGCTTGGAAACTTTGGAATGATGGAGCACCAATGGAGATGTTGGACCCCACATTAAGAGAAACCTATATTCCAAATGAAGTTATGAGATGCATCCACATTGGTTTACTTTGTGTTCAAGAAGACCCATTGGATAGACCTACAATGACTACAATTGTTTCATATCTGAGCAATGATTCAATTCAATTACCAAATCCTCAAGAACCAGCATTCTTTATGCATGGCCGAATGGAACAAACCATTGGAGAAAAGGAATCAAGTTCTTCTGATCAATATAGCAACAACTCCTACTCTGTCAATGAAATGTCTATTAGTAAATTCTTTCCTCGTTAG 1041 0.3948 MTTMESLQFNFSTIEAATNKFSLDNKLGEGGFGEVYKGILSSGQEIAVKRLSQSSGQGSEEFKNEVVVVAKLQHRHLVRLLGFCLEGEEKILVYEYVPNKSLDYILFDPERQRELDWTRRYKIIAGVARGIQYLHEDSRLRIIHRDLKASNVLLDGDMNPKISDFGMARIFGVDQTRGNTSHIVGTYGYMSPEYAMHGEFSIKSDVYSFGVLLMEIISGKKNSSFYQTGGAEDLLSYAWKLWNDGAPMEMLDPTLRETYIPNEVMRCIHIGLLCVQEDPLDRPTMTTIVSYLSNDSIQLPNPQEPAFFMHGRMEQTIGEKESSSSDQYSNNSYSVNEMSISKFFPR 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g0455 346 SMART serkin_6 21 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto2g0455 346 PANTHER PROTEIN, PUTATIVE ISOFORM 1-RELATED 2 344 - -
Sto2g0455 346 CDD STKc_IRAK 27 292 - -
Sto2g0455 346 Gene3D Transferase(Phosphotransferase) domain 1 97 303 - -
Sto2g0455 346 Gene3D Phosphorylase Kinase; domain 1 1 96 - -
Sto2g0455 346 ProSitePatterns Serine/Threonine protein kinases active-site signature. 142 154 IPR008271 GO:0004672|GO:0006468
Sto2g0455 346 ProSitePatterns Protein kinases ATP-binding region signature. 27 49 IPR017441 GO:0005524
Sto2g0455 346 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 2 344 - -
Sto2g0455 346 PIRSF ILK 2 304 - -
Sto2g0455 346 ProSiteProfiles Protein kinase domain profile. 21 307 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto2g0455 346 SUPERFAMILY Protein kinase-like (PK-like) 6 315 IPR011009 -
Sto2g0455 346 Pfam Protein tyrosine and serine/threonine kinase 22 292 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g0455 Sto-Chr2 3910711 3926982 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g0455 1 346 Receptor kinase-like Gene Family AT4G11530 65.230 7.52e-167 479
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Sto2g0455 PK_Tyr_Ser-Thr 1.4e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g0455 - - gmx:100305391 547.354