Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g0441 ATGTGCCGCGGCGATGTCCCCTCCCAGATTTGCCATGATTGCCTCCAAATTGCCAGCCAACGAATCGTCGCCAAGTGTCCCTACAAGAAAGAGGCCATCATATGGTACGAGGAGTGCATGCTTCGATATTCCGACCGTCCTTTCTTCTCTACCCTCCAAAAAGATCCTAATACCGGCTTCGTGTTTCCTGAGAGTAACGTCACAGAAAAACAAGTACTAGAAGACACAGTGAATGGTGTGGTGGAGGAGGCCACCAAATCTTCTGCTAAATTTGCAATTAAAGAAGCATACTTCGTTAGTAGTAGTACGAATAAAACGTTGTACACTCTTGCACAGTGCACGCCGGATTTGTCCACCAAAGATTGTCATGATTGTCTTCACGACATCATACTAAAATTATGGTCCCCAGATCTCGCTGTATATGGTTATAGTTTTCAGGGAGGAGAAATCTTTTATCCTAACTGCAACTTCATGTTTGGATTGCAACGAttttattacaacaacaatatgGTGCCACTGTCGTCTATATATTTTCCTAGTGAAGGAGCTCCAGCTATTGTTTGGTACGAGGTGTGCATGCTCCGTTATTCCAATCATTATTTCTTCTCTAAATTGGACACAAGCCCAAAATTCAATGAGTCTATGAATACTATACAAAACCAGCCAGACAACTTCAATCAACAACTAGCACCCACATTGGACAAATTGGTGGAAGAGGCAACGAAAACAGGGCATGTCGTTGCTAAAGATAGGAAATTTTTTGCAACAGAAGAAGTAGGCAGCAGTAGTGATACTGATTGGGAAAGATTGTATACTCTTGCACAATGCACACCAGATTTGTCCAAGGAAGATTGTGCCACATGTCTAAATAACATAGTGGAAGAAATCAAGTCCTGTTGTCTTGGAATGCGAAGCGTCATATTTATGTACCCTAGCTGCAACATGAGGTTTCAATCATACCCTTTTTATAACATCAAAGACAATAATGCCGTTGCAGAAGCCCCTACACCTACACCTACCCCTAGTGATATGTTTTCTAGTTCAACAAATAAAGGAAAAGAGGAAGGCCAATCACGAACCATTATTAAAGTAGTGGTTGTGGTCCTTATAATTGTTTCGGTCATACTTTTTTGTTTCGCATACTACATGATCTTACGAAGAAAAAAGAGTAGGAGATACAAGGCTATGCTTGAGGAAAATTGTACTCAAAGAAAACGAGTATTGAATTGGTTAGAGCGTTACAAAATTATAGCAGGAATTGCTCGAGGAATTCTTTATCTTCACGAACATTCTAGCCTTAAAGTAATACATCGTGATCTCAAACCCAGTAATATTTTGTTAGATGATGAGATGAATCCAAAAATTTCAGATTTTGGAATGGCAAAAATGGTTGCTATAAGTGAAACTGAAGGAAGTACAAACAGAATTGTTGGAACACATTGTCATGGATCACAACATATCGATGGGCTTTTAAGTTATGCTTGGAAGCAATGGAGAGGTGGAAACTGGTCAGATatatttgattcagatatgAAAGAAGTTGAATCATATAGTAATGAAGTGAATAGATGCATCCAAATTGGGTTGTTATGTGTTCAAGAAAATCCAGACGCTAGGCCTTCAATGAATACAATTGTTCAATATCTTAGTAATGATTCAATTCAGCTGCCATTTCCTCAAGAGCCTGCATTCTTCGGTCGAATGGGTCAGCCAACCATTGGAGGAATGGAATCACGTCCTGAAGAACATGCTACCAATGATTCTGAACCATGTTCTATTAATGAAATGTCTCTGAGTAATTTCTTTCCTCGTTAG 1815 0.3901 MCRGDVPSQICHDCLQIASQRIVAKCPYKKEAIIWYEECMLRYSDRPFFSTLQKDPNTGFVFPESNVTEKQVLEDTVNGVVEEATKSSAKFAIKEAYFVSSSTNKTLYTLAQCTPDLSTKDCHDCLHDIILKLWSPDLAVYGYSFQGGEIFYPNCNFMFGLQRFYYNNNMVPLSSIYFPSEGAPAIVWYEVCMLRYSNHYFFSKLDTSPKFNESMNTIQNQPDNFNQQLAPTLDKLVEEATKTGHVVAKDRKFFATEEVGSSSDTDWERLYTLAQCTPDLSKEDCATCLNNIVEEIKSCCLGMRSVIFMYPSCNMRFQSYPFYNIKDNNAVAEAPTPTPTPSDMFSSSTNKGKEEGQSRTIIKVVVVVLIIVSVILFCFAYYMILRRKKSRRYKAMLEENCTQRKRVLNWLERYKIIAGIARGILYLHEHSSLKVIHRDLKPSNILLDDEMNPKISDFGMAKMVAISETEGSTNRIVGTHCHGSQHIDGLLSYAWKQWRGGNWSDIFDSDMKEVESYSNEVNRCIQIGLLCVQENPDARPSMNTIVQYLSNDSIQLPFPQEPAFFGRMGQPTIGGMESRPEEHATNDSEPCSINEMSLSNFFPR 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g0441 604 Gene3D Transferase(Phosphotransferase) domain 1 482 556 - -
Sto2g0441 604 Gene3D Transferase(Phosphotransferase) domain 1 394 481 - -
Sto2g0441 604 Pfam Protein kinase domain 382 480 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto2g0441 604 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 10 ISOFORM X1 484 571 - -
Sto2g0441 604 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 10 ISOFORM X1 403 482 - -
Sto2g0441 604 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 10 ISOFORM X1 1 167 - -
Sto2g0441 604 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 10 ISOFORM X1 184 393 - -
Sto2g0441 604 ProSiteProfiles Gnk2-homologous domain profile. 1 48 IPR002902 -
Sto2g0441 604 SMART serkin_6 346 549 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto2g0441 604 MobiDBLite consensus disorder prediction 333 353 - -
Sto2g0441 604 ProSiteProfiles Protein kinase domain profile. 293 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto2g0441 604 Gene3D - 1 48 IPR038408 -
Sto2g0441 604 Gene3D - 57 164 IPR038408 -
Sto2g0441 604 Gene3D - 210 322 IPR038408 -
Sto2g0441 604 Pfam Salt stress response/antifungal 71 159 IPR002902 -
Sto2g0441 604 Pfam Salt stress response/antifungal 220 320 IPR002902 -
Sto2g0441 604 Pfam Salt stress response/antifungal 1 45 IPR002902 -
Sto2g0441 604 ProSitePatterns Serine/Threonine protein kinases active-site signature. 435 447 IPR008271 GO:0004672|GO:0006468
Sto2g0441 604 ProSiteProfiles Gnk2-homologous domain profile. 49 164 IPR002902 -
Sto2g0441 604 ProSiteProfiles Gnk2-homologous domain profile. 207 322 IPR002902 -
Sto2g0441 604 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 484 571 - -
Sto2g0441 604 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 403 482 - -
Sto2g0441 604 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1 167 - -
Sto2g0441 604 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 184 393 - -
Sto2g0441 604 SUPERFAMILY Protein kinase-like (PK-like) 402 567 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g0441 Sto-Chr2 3802308 3807293 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g0441 404 604 Receptor kinase-like Gene Family AT4G23150 40.756 4.32e-47 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Sto2g0441 Pkinase 8.2e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g0441 - - ahf:112705482 245.358