Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g0428 ATGGGTAATTGTTTATATCCTTTCTATTCTACAAGATTTGATGATAAATCCCAAAACACCCCAACCAAATGTGAAATATCAAAAACTAGTGGATCATCATCGGCTCCTTCCCTATTACCTGTTCCATCATACAGAGAAAAAAGGAATACATTAAGTGTTGTTCTTCCCACGCCAAGGTGGGAGGAGGATGAGATAGTGGCTTCACCAAATTTGAAAGTCTTCATGTTCAATGAGCTCAAGAATGCCACCAAGAAATTCTGCACAGAAAATCTTCTGGGAGAAGGAGGATTTGGGTATGTTTACAAGGGATGGATTGATTTACACACGTGCACAGCTTCCAAGCCAGGTTCTGGTATGGTTGTTGCTATAAAGAAGCTTAAGCCTGAAGTCTTTCGAGAAGTGAACTATCTTGGGCAACTGCACCATGGTAATCTGGTTAAATTGATTGGATACTGCTTGGAGGGAGAGGACCAGCTTTTGGTATATGAGTTCATGCCAAAAGGAAGCTTAGCCAATCATCTATTTGGAGGACCTAAGAGGCTTGGGTGGTGGTTGAGAATGAAAGTGGCGATAGATGCAGCAAGGGGTCTCTCTTTTCTTCACAATGCGGAGTCTCAAGTCATATACCGCGATTTCAAAGCTTCTAATATCCTACTTGATGCCGATTTCAATGCTAAACTCTCTGATTTTGGGTTAGCGAAGGAGGGTCCCACAGGGGATAATACTCACGTCTCCACTCAAGTTGTAGGTACTCAAGGCTACGCAGCACCCGAATATGTTGCCACAGGTAGGCTTACAGCAAAGAGTGACGTGTACAGCTTTGGGGTAGTGTTGTTGGAACTTATGTGTGGAAGAGCAGCCGTTGATAAGGAAAGAGCAGTGATAGAACAGAACCTGGTTGATTGGGCAAAACCATACTTAGGCGACAAACGAAGATTGTTTAGAATTATGGATACAAAATTGGGTGGTCGATACCCTCAGCAAGCAGCCTACATGGCTGCTGATCTAGCTCTTCTCTGCCTCAATACTGAAGCCAAAGCTAGACCTTCTATGACTCAAGTTCTAGCTACATTGGAGCAGATTCAAGCACTCAAAAAACAACATAATCACAATCATAATGATCATAATAATAATCCGTGA 1140 0.4263 MGNCLYPFYSTRFDDKSQNTPTKCEISKTSGSSSAPSLLPVPSYREKRNTLSVVLPTPRWEEDEIVASPNLKVFMFNELKNATKKFCTENLLGEGGFGYVYKGWIDLHTCTASKPGSGMVVAIKKLKPEVFREVNYLGQLHHGNLVKLIGYCLEGEDQLLVYEFMPKGSLANHLFGGPKRLGWWLRMKVAIDAARGLSFLHNAESQVIYRDFKASNILLDADFNAKLSDFGLAKEGPTGDNTHVSTQVVGTQGYAAPEYVATGRLTAKSDVYSFGVVLLELMCGRAAVDKERAVIEQNLVDWAKPYLGDKRRLFRIMDTKLGGRYPQQAAYMAADLALLCLNTEAKARPSMTQVLATLEQIQALKKQHNHNHNDHNNNP 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g0428 379 ProSitePatterns Serine/Threonine protein kinases active-site signature. 207 219 IPR008271 GO:0004672|GO:0006468
Sto2g0428 379 SUPERFAMILY Protein kinase-like (PK-like) 66 360 IPR011009 -
Sto2g0428 379 CDD STKc_IRAK 92 361 - -
Sto2g0428 379 Pfam Protein tyrosine and serine/threonine kinase 89 357 IPR001245 GO:0004672|GO:0006468
Sto2g0428 379 Gene3D Phosphorylase Kinase; domain 1 66 164 - -
Sto2g0428 379 Coils Coil 358 378 - -
Sto2g0428 379 MobiDBLite consensus disorder prediction 20 39 - -
Sto2g0428 379 ProSiteProfiles Protein kinase domain profile. 86 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto2g0428 379 ProSitePatterns Protein kinases ATP-binding region signature. 92 125 IPR017441 GO:0005524
Sto2g0428 379 PANTHER PROTEIN KINASE 2B, CHLOROPLASTIC 27 369 - -
Sto2g0428 379 MobiDBLite consensus disorder prediction 20 40 - -
Sto2g0428 379 PANTHER OS01G0588500 PROTEIN-RELATED 27 369 - -
Sto2g0428 379 Gene3D Transferase(Phosphotransferase) domain 1 165 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g0428 Sto-Chr2 3703495 3705369 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g0428 61 358 Glycoside Hydrolase AT3G07070 49.515 1.10e-92 282
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Sto2g0428 PK_Tyr_Ser-Thr 2.5e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g0428 - - pop:7459048 507.679