Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g0421 ATGGCTTCCCCTCATCAATCTCTTCTTGACAAGCCCAGAAAGCCCATTTCCAAAAccatcttcctcctcctttcttTTGTTGCCATCATAGGCTCCTCTGCCCTTATTTCTTCCTACATCTTCGAACCCACCTCCTTCTTCACCCTCTCATCCTCCAACCATGTGTGTGACCATGCCCTTCACAAATCCTCATGCCAAGCCCATGTCTCAGAATTGGCCAAAGTTTCAACCTTTACCACACAACACCAAAAACTCAACCTCCTCCACTCCCTCCTAATCAAATCCACCTCCCAAATCCAGAATGTTATGGACACTACCAAAGCCATCAAATACAGAATCAACACTCCAAAACAGCAAGAAGCCTTGAAAGGATGTGAGACCCTCCTAGACTTGTCACTTGACAGAGTTTGGGACTCAATGGTGGCTCTGTCTAACAACCAAGCCACCCAATCCTTGCAAGATGCTCACACATGGCTAAGTGGTGTGCTCACTAACCACATCACTTGCTTGGATGGGCTAGAAGGCTCAGCCAGAACCCTCATGGAGCCTGAGCTCAATGACTTGGTCTCTAGAGCCAGAACCACACTAGCCATACTTGTTCATGTCTTGCCTTATGATTTTAATGAATCTATTGAGGAATCACTTAATGGGGGATTTCCATCATGGGTGACAAGTAAGGATAGGAGGCTTTTGGAGGGTAATTCAGCTAACATAAATGCTAATGTTGTGGTGGCTAAGGATGGAAGTGGGAAGTTTAGGACAGTGAAAGAGGCAGTGGCTTCAGCTCCTGATAATGGTAAGAGTAGGTATGTTATATATGTGAAGAAAGGAGTGTATAAGGAGAATGTAGAAattgggaagaagaagaagaatgtgaTGCTTGTGGGTGATGGTAAGGATGCAACTATCATCACTGGAAGCTTGAATTTTGTGGATGGAGTACCTACCATGAGCACCGCCACTGTTGCTGCATTAGGAGATGGCTTCATAGCTCAAGACATAGGGTTCCAAAACACAGCAGGCCCTCAGAAGCACCAAGCGGTGGCTCTCCGTGTCGGCGCCGACCTCTCCGTCATAAACCGCTGCCGCGTCGACGCCTTCCAAGACAGTCTCTACGCCCACACCAACAGGCAGTTCTATCGTGACTCCTTCATCACGGGCACAGTTGACTTCATCTTTGGTAACGCGGCAGTTGTGTTCCAAAAGTGTGACATTGTGGCCCGAAAGCCCATGGATAACCAGAAGAACATGCTCACGGCCCAAGGACGTGCAGACCCAAACCAGAACACTGCAACATCCATTCAGCAATGTAACTTAACACCAAGCTCAGATCTCAAGCCCGTAGTGAGCAAAATCAAAACCTACTTGGGCCGCCCATGGAAGGAGTACTCTCGGACTGTAATCTTGCAGTCTTTCATAGATAGCCATATTGACCCAGTAGGATGGTACCCTTGGGATGATAAGCAATCCACATTGAAAAACTTGTACTATGGAGAGTATATGAACAATGGGCCTGGGGCTGGAACTAGCAAGAGAGTGAATTGGGCCGGGTTCCATGTGATTAAAACTGATGCTGAGGCCAGTAAGTTCACTGTGGCCCAACTCATTCAAGGTGGGAGTTGGTTGAAGAACACTGGTGTGGCCTACATTGAGGGGCTTTAA 1662 0.4627 MASPHQSLLDKPRKPISKTIFLLLSFVAIIGSSALISSYIFEPTSFFTLSSSNHVCDHALHKSSCQAHVSELAKVSTFTTQHQKLNLLHSLLIKSTSQIQNVMDTTKAIKYRINTPKQQEALKGCETLLDLSLDRVWDSMVALSNNQATQSLQDAHTWLSGVLTNHITCLDGLEGSARTLMEPELNDLVSRARTTLAILVHVLPYDFNESIEESLNGGFPSWVTSKDRRLLEGNSANINANVVVAKDGSGKFRTVKEAVASAPDNGKSRYVIYVKKGVYKENVEIGKKKKNVMLVGDGKDATIITGSLNFVDGVPTMSTATVAALGDGFIAQDIGFQNTAGPQKHQAVALRVGADLSVINRCRVDAFQDSLYAHTNRQFYRDSFITGTVDFIFGNAAVVFQKCDIVARKPMDNQKNMLTAQGRADPNQNTATSIQQCNLTPSSDLKPVVSKIKTYLGRPWKEYSRTVILQSFIDSHIDPVGWYPWDDKQSTLKNLYYGEYMNNGPGAGTSKRVNWAGFHVIKTDAEASKFTVAQLIQGGSWLKNTGVAYIEGL 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g0421 553 Gene3D Invertase/pectin methylesterase inhibitor family protein 53 202 IPR035513 -
Sto2g0421 553 ProSitePatterns Pectinesterase signature 1. 266 285 IPR018040 -
Sto2g0421 553 PANTHER PECTINESTERASE 20 551 - -
Sto2g0421 553 TIGRFAM PME_inhib: pectinesterase inhibitor domain 55 178 IPR006501 GO:0004857
Sto2g0421 553 SUPERFAMILY Pectin lyase-like 238 552 IPR011050 -
Sto2g0421 553 Gene3D - 234 553 IPR012334 -
Sto2g0421 553 SMART PMEI_2 47 198 IPR006501 GO:0004857
Sto2g0421 553 CDD PMEI-like_4 63 200 - -
Sto2g0421 553 Pfam Plant invertase/pectin methylesterase inhibitor 53 185 IPR006501 GO:0004857
Sto2g0421 553 Pfam Pectinesterase 241 538 IPR000070 GO:0030599|GO:0042545
Sto2g0421 553 PANTHER PECTINESTERASE 20 551 - -
Sto2g0421 553 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 54 198 IPR035513 -
Sto2g0421 553 ProSitePatterns Pectinesterase signature 2. 385 394 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g0421 Sto-Chr2 3665413 3667582 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g0421 1 553 Carbohydrate Esterase AT1G11580 56.762 0.0 634
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g0421 K01051 - gmx:100815836 798.505
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto2g0421 2 3665413 3667582 Sto2g0421 2 3665413 3667582 ECH