Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g0419 ATGGCTTCCACCCAACCTCTTctacccaaacccaaatcctccATTTCCAAAACTTTCCTCCCAACTCTTTCTCTAATTGCTATCATAAGCTCTTCAGCTCTTTTTGCATCTTATCTCatcaaacccaaacccaccaTCTCTTTCTCCAACCATATTTGTGACCATGCCCTTCACAAGCCCTCATGCCTAGCCCATGTCCTAGAAGTAACCAATGGTTCGGTGGTCTTGACCACACAAGACCAAAAAGTTCACTTACTCCGATCCATCCTTATGAACTCAAACTCACACATCCGCAAAGCTATGCACACAGCGAGAGCCATAAAAAACAGAATAACCAACGGTCCAATTATGGAGCAAAAGGCTTTGAGAGAATGTGAGAAGCTTCTAGACTTGTCAATAGACAATGTCTTTGACTCATTGGTGGCTCTAACCAAAAACACCACCAAATCCCACCAAGATGCTCACACATGGCTAAGTTCCGTGCTCACTAACCACTTCACTTGCTTGGATGGCTTACAAGGCCCGGCTCGAGCCCTCATGGAGCCCCAGCTCAATGGCTTGATTTCTCGAGCTAGGACCACACTGGCCATTCTGGTTCACACTCTCCCTTCTAATTCAAACCTCAATTATAATTCCATTGATGAGGCACTAAGTGGGGAATTTCCCTCTTGGGTGTCAAGGAAGGATAGGAAGGTTCTGGAGGCTTCTTCGGTGAAGGACATTGAGGTGAATGTTGTGGTGGCAAAGGATGGAAGTGGTAGTTATGAGACTTTGGGTGAGGCTGTGGCAGCGGCACCTAATAAAAGTAGTACaagatttattatatatgtgaaaGAGGGAACATATAAAGAGAATGTTGAAATtggtaaagagaagaagaacaTAATGATAGTGGGTGATGGTATGGATCAAACTATAATCACAGGCAACTTGAGTTATATGGACCAAATACCTACCTCTTTGACTGGCACAGTCATTGCTCTTGGGAGTGGATTCATAGCTCAAGACATATGGTTCCAAAACACAGCAGGACCTGAGAATCACCAAGCCGTGGCTCTTCGTGTAGGAGGTGACCTATCCGTCATAAATCGGTGTCGTATTGACGCCTTCCAAGACTCTCTCTATGCTCACACCAACAGGCAATTCTACCGTGATTGCTTCATCACAGGCACCATCGACTTCATCTTCGGTAACGCAGCAGTTGTGCTCCAAAAGTGCAACATCGTGGCTCGAAGGCCCATGGCCCACCAAAAAAACATGCTCACAGCCCAAGGACGCACCGACCCAAACCAGAACACAGGTACTTCCATTCAACAATGTTACATAACACCAAGCCCAGATCTTGAGCCCGCTACCAAAACCTACTTGGGCCGCCCATGGAAAGCCTTCTCTAGAACTGTTGTGATGCAGTCGTTGTTGGATAGCCATATTGACCCAGCAGGATGGCACCCTTGGGATGACAACAAAACGACGTTGGAGACTTTGTATTATGGAGAGTATATGAATTATGGGCTTGGTGCGGGTACCAGTGGGAGAGTGGACTGGCCCGGTTATCATGTAATTACGAGTGCTGATGAGGCCCGTAAATTCACAGTGGCCGAGCTCATTCAAGGTGATGTTTGGTTGAAGAATACTGGAGTGGATTACATTGAGGGGCTGTAG 1662 0.4452 MASTQPLLPKPKSSISKTFLPTLSLIAIISSSALFASYLIKPKPTISFSNHICDHALHKPSCLAHVLEVTNGSVVLTTQDQKVHLLRSILMNSNSHIRKAMHTARAIKNRITNGPIMEQKALRECEKLLDLSIDNVFDSLVALTKNTTKSHQDAHTWLSSVLTNHFTCLDGLQGPARALMEPQLNGLISRARTTLAILVHTLPSNSNLNYNSIDEALSGEFPSWVSRKDRKVLEASSVKDIEVNVVVAKDGSGSYETLGEAVAAAPNKSSTRFIIYVKEGTYKENVEIGKEKKNIMIVGDGMDQTIITGNLSYMDQIPTSLTGTVIALGSGFIAQDIWFQNTAGPENHQAVALRVGGDLSVINRCRIDAFQDSLYAHTNRQFYRDCFITGTIDFIFGNAAVVLQKCNIVARRPMAHQKNMLTAQGRTDPNQNTGTSIQQCYITPSPDLEPATKTYLGRPWKAFSRTVVMQSLLDSHIDPAGWHPWDDNKTTLETLYYGEYMNYGLGAGTSGRVDWPGYHVITSADEARKFTVAELIQGDVWLKNTGVDYIEGL 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g0419 553 PANTHER PECTINESTERASE 12 552 - -
Sto2g0419 553 Gene3D Invertase/pectin methylesterase inhibitor family protein 48 200 IPR035513 -
Sto2g0419 553 Pfam Pectinesterase 244 539 IPR000070 GO:0030599|GO:0042545
Sto2g0419 553 ProSitePatterns Pectinesterase signature 1. 269 288 IPR018040 -
Sto2g0419 553 TIGRFAM PME_inhib: pectinesterase inhibitor domain 24 176 IPR006501 GO:0004857
Sto2g0419 553 SUPERFAMILY Pectin lyase-like 243 552 IPR011050 -
Sto2g0419 553 ProSitePatterns Pectinesterase signature 2. 388 397 IPR033131 -
Sto2g0419 553 SMART PMEI_2 44 197 IPR006501 GO:0004857
Sto2g0419 553 CDD PMEI-like_4 61 199 - -
Sto2g0419 553 Pfam Plant invertase/pectin methylesterase inhibitor 49 180 IPR006501 GO:0004857
Sto2g0419 553 Gene3D - 238 553 IPR012334 -
Sto2g0419 553 PANTHER PECTINESTERASE 12 552 - -
Sto2g0419 553 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 51 180 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g0419 Sto-Chr2 3655069 3657780 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g0419 3 553 Carbohydrate Esterase AT1G11580 51.150 0.0 554
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g0419 K01051 - gmx:100815836 702.205