Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g0406 atggCTTGCTTTCCTTGTTGCAAATCTGATGTTGAAACCGCACCTTTAAGCAAAACCCCCACAGAACATTTAAAaacaaggaaatccacaatcaAATCAATTTGGGGTGCTCTCTCTTCTAAAACAGGTAGTAGCAGGCAAAGACAAATTGCTGcagaaataagaaaatatggAACAGCCAAAAACAATGCAAAAGTATTCACATATCAAGAAATCGCCTCAGCCACTAACGACTTTAGTTCTGATTGTTTGATTGGGGAAGGAGGCTTTGGGAATGTGTACAAAGGATTCATCCAAAGCATTAATCAAGCTGTGGCTGTGAAGCAACTAGACAGAAATAAATTGCAAGGAACAAGAGAATTCTTCACAGAAGTAGTGATGTTGAGTTTGGTGAGACATCCAAACCTTGTGAGGCTGATTGGTTATTGTGTTGAAGGAGATCATAGGATCTTGGTTTATGAATTCATGGCCAATGGAAGCTTGGAAAGTCACCTTCTAGGACATGTCACAACTAAGTCTGATGTTTATAGTTTTGGTGTTGTCATGTTGGAGATCATTACTGGTAGAAGAGTCTATGACACTAGTAGGGCAGAATCAGAGCAGAATCTCATTGATTGGGCACAACCTCTGTTTGAGGACAGAGAAAAGTTCACCCTAATGGTAGACCCTTTATTGAAGGACAAATTCCCAGTGAAGGGACTGTTCAAAGCACTTGCAGTGGCAGCCATGTGTCTTCAAGAGGAAGCAGACACAAGGCCATTGATGAGTGATGTTGTGACAGCTCTTCAGCATCTAACACTTCCAGTTAATGGAGACAAATGCAATAAGGGTGAATCTGTCAAATTTGCAGGCCATGTTGAATCTTTTAGGGTTGGAAAACACATCTTGGGGAGGAAGCCATTAGAGCTTgagcttcttctcttcttcctcttccatgTCATTAGCAACACCCAGAAACTAGAATGA 966 0.383 MACFPCCKSDVETAPLSKTPTEHLKTRKSTIKSIWGALSSKTGSSRQRQIAAEIRKYGTAKNNAKVFTYQEIASATNDFSSDCLIGEGGFGNVYKGFIQSINQAVAVKQLDRNKLQGTREFFTEVVMLSLVRHPNLVRLIGYCVEGDHRILVYEFMANGSLESHLLGHVTTKSDVYSFGVVMLEIITGRRVYDTSRAESEQNLIDWAQPLFEDREKFTLMVDPLLKDKFPVKGLFKALAVAAMCLQEEADTRPLMSDVVTALQHLTLPVNGDKCNKGESVKFAGHVESFRVGKHILGRKPLELELLLFFLFHVISNTQKLE 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g0406 321 Gene3D Transferase(Phosphotransferase) domain 1 165 267 - -
Sto2g0406 321 PANTHER RECEPTOR SERINE/THREONINE KINASE 1 166 - -
Sto2g0406 321 PANTHER RECEPTOR SERINE/THREONINE KINASE 167 292 - -
Sto2g0406 321 Gene3D Phosphorylase Kinase; domain 1 39 155 - -
Sto2g0406 321 PANTHER OS07G0668900 PROTEIN 1 166 - -
Sto2g0406 321 PANTHER OS07G0668900 PROTEIN 167 292 - -
Sto2g0406 321 ProSiteProfiles Protein kinase domain profile. 79 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto2g0406 321 Pfam Protein tyrosine and serine/threonine kinase 84 165 IPR001245 GO:0004672|GO:0006468
Sto2g0406 321 ProSitePatterns Protein kinases ATP-binding region signature. 85 108 IPR017441 GO:0005524
Sto2g0406 321 SUPERFAMILY Protein kinase-like (PK-like) 64 263 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g0406 Sto-Chr2 3491634 3497264 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g0406 162 271 Glycoside Hydrolase AT3G07070 60.909 9.50e-38 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Sto2g0406 PK_Tyr_Ser-Thr 1.2e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g0406 - - gmx:100305361 225.713