Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g0400 ATGGACCGCGATGAACCTCCTTGTCCATCACCGTACGTTTCTTCGTCTTCTTCGCATCTTAGGGAAATCTCCAATTACAGAACGCCCAAACGTCCTTCTCACAATCTCAACTTCCAATCCCCTTGCCAGCAGTTTTTCACTGCATCTAAGCAAACGCCGCGATCTTCGGCGTTTCGTCGTCGTCCTTCCATCGCTCCGCCGTCGTCTTCAGCTCGGACCAAGAAGTCATCCGTGGCAGCGGCCAGGAAACTCAAGGCGTTCGAACTTGAGCAGTCTCAGTCCTCGAGGAAGGCTCAAGTCAAGAAAGAGCAGTCTCTTAGATCGCTAGCCAAGTCCATCACCGTTTGgcttaattttttgtttgaaaacCCACGGACGTGCGGATGTGACTTGTCCATAGCCGGAATGCAGATCGGGGATGTGGATTCTGAGGCAATGGGAACGAAAGGGAAGAGGGATAACGGTCCTGGGATTTCCGTTGGGGTTGATGCAGCCTGGCGTACTCCGAAGCGGCAGAGGAAGATGTGGCCGCGAACTGAATACCGTGATGGTAAGGAGAATGCTGAAGTGGAGTTGCCCAATTCCTTGTTTTTGTACTTGAGGGATTCTCTGAAGGAAGTTTGCAGTTTTGATGATTTGAAGCAGCGAATGAGGATTTATCTGAGCTTGGGGAGTTGTAAAGAGATTTTTGAAGTTATGAATCAAATCACAAAGAATATTGATGAAGGAAGGTTAAAGTTGAAGCCACATTGCCCAATAGTAACAGATGTTGGATTGAAAAATAAGGCCACAAGAATCCTTATGTGTTATAATCCAATTTGGCTCCGAATTGGATTATATATAATCTTTGGTGGTGACTCCTTGGTGCCAAACGGAGATGTTGATTCTGAACAAGAAATCACATTTTTGAAAATGGTCATTGAGAAGCAATTTTTTTCACATGCGGGTTTAGCAAAAGCATATGCTTATAATAAGATGGTTGACGGCCTATATCGGCCAGGATACTATGAGAATTTGGGGAATGTAATTTTAAAGAGAATATTATTGCTCGTGATTATCTTGGATAGAGTTAAAAGTCAGAGTTGCCTTAAACTTAAGTATGGCATTGATGGATTAGATGGGGGTTCCCCTTTAATGTTCAAGGCAGAATCTTGGATAAAATCAAGTGGCCAGGTTATCAATGAATTCCTATCATCGGATGTAATGCACGGAGAAGGAAATCTTCTGGCTCATTTAGTTATCATAGGGTACAAAGTATCTCATCAGCAGGCGCCTCTCGTGGAGTATGACTTCAAGGTCAGAGATTTATTTGTAGATCTCCAAGATGGATTAAAGCTGTGCAGAGCTATTCAACTCTTGCAACATAATTCTTCTATTCTCACgAAAATTGTAGTTCCCTCAGATACTTATAAGAAAAATTTGGCAAACTGTGGTCTTGCCCTGCAATACCTTAAGGAAGCTGGTGTGTTGCTACATGATGAGGATGACATGATGATTGTGGCAAACGATGTTGCTAGTGGGGATAAAGAACTTATTCTCTCCTTGCTCTGGAATATGTTTGTTCACTTGCAGCTACCTCTTTTGGTCGATACAACAAGTTTACTTGAGGAAATTGCTAAAATTCGAGGGCTTGGCATGGATGCTATTAACCGTGCGAATTCAAGTTCTTTGGAATTGATTTTGAATTGGATTCAGGCAGTTTGTGAAAATTACGATTGTGGGGTTGACAATTTTCATTCGTTAGTTGATGGAAAACCTATCTGGTGCTTACTTGACTATTATTTCCAGAAAGAACTTCATAATTCCTGTTCCTTTAAGGAAGTTAATCAGAAAAGTGGCAAGGAATCAATAATGTCTGTCAATGACTATTCAGATGCAGTgcacaattttatattatcacaGAAATTGACTACATTATTAGGAAATTTTCCAGAGGTACTTCAAATTAGTGACCTACTTGAATTTAATGGCGCTTCCAGTAATCGAAGTGTGGTTATATTGTTGGTGTTCCTCGCAAGGCAATTATTTGTCAAGAAAAATGtgGATCAATTGAATTTCCATAAGCTCCTAGGCTGTGATTGCCAAAGTCTGCACCGGAAACATTTGAGAACGGGGCAGTGCCTGTCAAGTTCTGAAGCCGTACAAAATCCAGAAGCTTCGGATGTAAAAGACAGCGAAGATGCTGCAAGAAAATTCAAGGCCATCCAGGCTTGGTGGCAAGATATGGCTGAAAGAAATCATAAATCTTTCATCAAACCAACTGCATGCAGAACCGTTCCATGGAGCACCAACACTGGAAGAGAATCTGCTGCGATAACAATACAATCACATTTTAGACGATTGGTTGCTCGTCGCATGTTTCTCAAGGTGCTGAATGCTGTATCTCTTTTGCAAACTGTTTTCCGAGCTTGTCTTGAAGTAAGGAAGGGGTCATTATTCAATACTGTCCCTGTCCAAAACTTTTCATATGCAATGCAGAAGAATTCTGAAACATATAGGAGATACGTTATATTTTTTGTTCACAGACACTCTTTTTTGAAGTTAAAGAGGTCTGCATTGCTTATCCAGCGAGCAGTGAGGAATTGGATCTCTTGTAGGCATCAGAAGGGATGTAGTGTAATTCCTGATCTTACGGTTTCAGATTGTGTTGCTGCTGCGACTATTATTCAGAAATTTGTTCGTGGTTGGATGGCACGATCTAGATATATTCGTATGCTAGATCAGAAAGAGAAAGCTTCAAATTTGCACCTACAAAAGGTTACGTTTTATCTTCAAACAAAAGCAGCCATCAAGATTCAGCTTGCTTGGAAGAAGTATATATGCTGCAGGTCTACACAGAAGCACTTAAGTGCTATTAAAATTCAATGTAATTTCCGGAGATGGCTGTTAAGGAAAAGATTTTTGAATCAGATTCAAGCTATCTTGAGAATCCAATGCCATTTTCGAAAGTCAAGATGTGTAAAGGCTTTTCAACACTTCAAAATTGCATTTAAGGCAGCTATTGTCATTCAGTCTTTTGTACGTGCATGGATTGCACGAAAGGAAGCATATGCACGTAGGAATCACATCGTTGCAATTCAAAGGCATTGTCGTGGCTGGCTGGCGAAAAGggactttttggtcaaaagaGAGGCTGCAATGAAGATCCAAAGTGTCATTCTTAGTCTGAAATGTCAGAAGGCTTTGAATTGTCAGAAAGACGCTGCGTTGGAGATCCAGCGTTTTGTTAGGGGGCATTTAACTCGAAATAGACTATTAGGCGGTGCTTCTCTGCAACGAGCAGTCATTCCTAGTGGATGCATTTCAGGATCAGTTGGCTACAGTAGTTTTCAACTGGAGCTAGTCTTGTCTTCTGTTGTGAAGTTGCAGCGATGGTGGAAAGGTGTTCtgtttcttaaattaaaaacaaaacctGTCATTATAATCCAGTCTTGTATTCGTGGGTGGATTGCTAGGCGAAGGGCAAGTGTTCGCAGACGTCATATAGTTGTTATTCAATCCCGCTGGAGAGGCCACCTTGCCCGGAAAGAGTCAAAAGAGCAGCTGCAAGACTTGCGTCTGAGAATGCAAAAAACTGCCAGAAATGTGGATGATAGCAAGCGCCTCATAAACAGACTCCTAGCAGCGCTTTCAGAGCTACTCAATATGAAGAGTGTCAGTGGCATCCTTCATACTTGTGCAACTTTGGATATGGCCACAGAACATTCTCAGAGATGTTGTGAAGAACTTGTGGCCGCAGGGGCTATTGACACGTTACTAAAGCTTATTCGCTCAGTAAGCCGAAGTATACCTGATCAGGAGGTTCTTAAGCATGCTCTTTCAACTCTTCGAAATCTTGCCCGCTATCCTCACTTACTGGAAGTTTTGATCCAAAGCAACGGTTCTATACAGACAATAATCTGGGAATTACTGAGGAATAAGGAGGATGGCTACTTCATTGCTTCTGAACTTCTGAAGAAAATATCTTCAACTCACAATGGTGTTGAATCGTTGCGCAAGTTACCCGCACTTGTAAAACGACTGCATGCTCTCGTTGAGGAACTTACAAGGAAGGCAATCTATGAGAAAAGACATGGTAGGGGTCCTGGTCCAGTTGTAAGAGAAAACAGAGAGAGAAGATTGAAGGAAGCTTCTGAGATTCTGAAACTGATAACTTGCTCCTAA 4164 0.4121 MDRDEPPCPSPYVSSSSSHLREISNYRTPKRPSHNLNFQSPCQQFFTASKQTPRSSAFRRRPSIAPPSSSARTKKSSVAAARKLKAFELEQSQSSRKAQVKKEQSLRSLAKSITVWLNFLFENPRTCGCDLSIAGMQIGDVDSEAMGTKGKRDNGPGISVGVDAAWRTPKRQRKMWPRTEYRDGKENAEVELPNSLFLYLRDSLKEVCSFDDLKQRMRIYLSLGSCKEIFEVMNQITKNIDEGRLKLKPHCPIVTDVGLKNKATRILMCYNPIWLRIGLYIIFGGDSLVPNGDVDSEQEITFLKMVIEKQFFSHAGLAKAYAYNKMVDGLYRPGYYENLGNVILKRILLLVIILDRVKSQSCLKLKYGIDGLDGGSPLMFKAESWIKSSGQVINEFLSSDVMHGEGNLLAHLVIIGYKVSHQQAPLVEYDFKVRDLFVDLQDGLKLCRAIQLLQHNSSILTKIVVPSDTYKKNLANCGLALQYLKEAGVLLHDEDDMMIVANDVASGDKELILSLLWNMFVHLQLPLLVDTTSLLEEIAKIRGLGMDAINRANSSSLELILNWIQAVCENYDCGVDNFHSLVDGKPIWCLLDYYFQKELHNSCSFKEVNQKSGKESIMSVNDYSDAVHNFILSQKLTTLLGNFPEVLQISDLLEFNGASSNRSVVILLVFLARQLFVKKNVDQLNFHKLLGCDCQSLHRKHLRTGQCLSSSEAVQNPEASDVKDSEDAARKFKAIQAWWQDMAERNHKSFIKPTACRTVPWSTNTGRESAAITIQSHFRRLVARRMFLKVLNAVSLLQTVFRACLEVRKGSLFNTVPVQNFSYAMQKNSETYRRYVIFFVHRHSFLKLKRSALLIQRAVRNWISCRHQKGCSVIPDLTVSDCVAAATIIQKFVRGWMARSRYIRMLDQKEKASNLHLQKVTFYLQTKAAIKIQLAWKKYICCRSTQKHLSAIKIQCNFRRWLLRKRFLNQIQAILRIQCHFRKSRCVKAFQHFKIAFKAAIVIQSFVRAWIARKEAYARRNHIVAIQRHCRGWLAKRDFLVKREAAMKIQSVILSLKCQKALNCQKDAALEIQRFVRGHLTRNRLLGGASLQRAVIPSGCISGSVGYSSFQLELVLSSVVKLQRWWKGVLFLKLKTKPVIIIQSCIRGWIARRRASVRRRHIVVIQSRWRGHLARKESKEQLQDLRLRMQKTARNVDDSKRLINRLLAALSELLNMKSVSGILHTCATLDMATEHSQRCCEELVAAGAIDTLLKLIRSVSRSIPDQEVLKHALSTLRNLARYPHLLEVLIQSNGSIQTIIWELLRNKEDGYFIASELLKKISSTHNGVESLRKLPALVKRLHALVEELTRKAIYEKRHGRGPGPVVRENRERRLKEASEILKLITCS 1387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g0400 1387 ProSiteProfiles IQ motif profile. 1065 1094 IPR000048 GO:0005515
Sto2g0400 1387 Pfam IQ calmodulin-binding motif 1159 1177 IPR000048 GO:0005515
Sto2g0400 1387 Pfam IQ calmodulin-binding motif 1067 1085 IPR000048 GO:0005515
Sto2g0400 1387 Pfam IQ calmodulin-binding motif 950 967 IPR000048 GO:0005515
Sto2g0400 1387 Pfam IQ calmodulin-binding motif 1023 1039 IPR000048 GO:0005515
Sto2g0400 1387 Pfam IQ calmodulin-binding motif 884 902 IPR000048 GO:0005515
Sto2g0400 1387 Pfam IQ calmodulin-binding motif 998 1015 IPR000048 GO:0005515
Sto2g0400 1387 Pfam IQ calmodulin-binding motif 1139 1154 IPR000048 GO:0005515
Sto2g0400 1387 Pfam IQ calmodulin-binding motif 769 785 IPR000048 GO:0005515
Sto2g0400 1387 PANTHER UNCHARACTERIZED 9 1386 - -
Sto2g0400 1387 ProSiteProfiles IQ motif profile. 998 1025 IPR000048 GO:0005515
Sto2g0400 1387 Gene3D - 1183 1379 IPR011989 -
Sto2g0400 1387 ProSiteProfiles IQ motif profile. 884 911 IPR000048 GO:0005515
Sto2g0400 1387 MobiDBLite consensus disorder prediction 1 77 - -
Sto2g0400 1387 ProSiteProfiles IQ motif profile. 1135 1162 IPR000048 GO:0005515
Sto2g0400 1387 PANTHER ABNORMAL SPINDLE MICROTUBULE ASSEMBLY 9 1386 - -
Sto2g0400 1387 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 946 1015 IPR027417 -
Sto2g0400 1387 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 1247 1294 IPR000225 GO:0005515
Sto2g0400 1387 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 996 1085 IPR027417 -
Sto2g0400 1387 ProSiteProfiles Calponin homology (CH) domain profile. 402 524 IPR001715 GO:0005515
Sto2g0400 1387 SMART arm_5 1236 1281 IPR000225 GO:0005515
Sto2g0400 1387 Coils Coil 1175 1202 - -
Sto2g0400 1387 ProSiteProfiles IQ motif profile. 1019 1048 IPR000048 GO:0005515
Sto2g0400 1387 SMART iq_5 969 991 IPR000048 GO:0005515
Sto2g0400 1387 SMART iq_5 1157 1179 IPR000048 GO:0005515
Sto2g0400 1387 SMART iq_5 1134 1156 IPR000048 GO:0005515
Sto2g0400 1387 SMART iq_5 946 968 IPR000048 GO:0005515
Sto2g0400 1387 SMART iq_5 766 788 IPR000048 GO:0005515
Sto2g0400 1387 SMART iq_5 1018 1040 IPR000048 GO:0005515
Sto2g0400 1387 SMART iq_5 1041 1063 IPR000048 GO:0005515
Sto2g0400 1387 SMART iq_5 881 903 IPR000048 GO:0005515
Sto2g0400 1387 SMART iq_5 1064 1086 IPR000048 GO:0005515
Sto2g0400 1387 SMART iq_5 847 869 IPR000048 GO:0005515
Sto2g0400 1387 SMART iq_5 995 1017 IPR000048 GO:0005515
Sto2g0400 1387 ProSiteProfiles IQ motif profile. 947 976 IPR000048 GO:0005515
Sto2g0400 1387 SUPERFAMILY ARM repeat 1204 1346 IPR016024 -
Sto2g0400 1387 Gene3D - 883 948 - -
Sto2g0400 1387 Gene3D - 997 1042 - -
Sto2g0400 1387 Gene3D - 1133 1182 - -
Sto2g0400 1387 Gene3D - 767 812 - -
Sto2g0400 1387 Gene3D - 1043 1094 - -
Sto2g0400 1387 Gene3D - 949 996 - -
Sto2g0400 1387 ProSiteProfiles IQ motif profile. 1158 1186 IPR000048 GO:0005515
Sto2g0400 1387 SUPERFAMILY Calponin-homology domain, CH-domain 329 598 IPR036872 -
Sto2g0400 1387 Gene3D - 418 524 IPR036872 -
Sto2g0400 1387 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1117 1181 IPR027417 -
Sto2g0400 1387 Pfam Calponin homology (CH) domain 432 522 IPR001715 GO:0005515
Sto2g0400 1387 Pfam Armadillo/beta-catenin-like repeat 1237 1281 IPR000225 GO:0005515
Sto2g0400 1387 ProSiteProfiles IQ motif profile. 767 795 IPR000048 GO:0005515
Sto2g0400 1387 MobiDBLite consensus disorder prediction 10 76 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g0400 998 1193 Myosins gene family AT5G43900 24.747 8.69e-08 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g0400 K16743 - jre:108981478 1659.81