Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g0390 ATGGGTTGTCATAGTAGCAAGGAGAAAAAATCAAAGCCAGAATTTAGTGGTAAAGGATCATCCACGGGTAGTGGTGGTGTTAATAGCGCTACACATCAAAGTTACCACTCTGTTCAGCCTCCCGCCACTCAGATTCACACTTCagaacccaaaccccaaccaaATCCGCCGGCGGCGGCGGAGATCGCAGCGCAGAAGCCGGCTGTACGGAATGTCAGAGCTGCGCTGCAGCAGAAGGCGGAAGCGGCTACTATTCTGGGTAAGCCTCTTGAAGATGTGAAGAATTTCTACACCTTAGGGAAGGAACTTGGGAGAGGGCAATTTGGGATTACGTATTTGTGTACTGAGAATTCCACTGGACGCACTTATGCTTGCAAATCTATATTGAAGAGGAAGCTTGTGTCTAAAGCGGATAAGGATGATATGAGGAGGGAGATTCAGATCATGCAGCATTTGTCTGGGCAGCCCAATATTGTGGAGTTCAAGGGTACTTATGAAGATAGGTATTCAGTGCACCTTATAATGGAGCTTTGTGCTGGTGGGGAGCTGTTTGATAGAATCATTGCTCAGGGTCACTACTCAGAGAGAGCTGCTGCTTCAATTTGTAGAGCCATTGTTAATGTTGTGCACATTTGTCACTTCATGGGGGTGATGCATCGTGATCTGAAGCCTGAGAATTTTTTGCTTTCAAGCAAGGATGAGGATGCAACGCTTAAGGCTACTGATTTTGGATTGTCTGTCTTCATTGAAGAAGATTTGAAAGCTGCAATTACTGGTTATGGAAATTTGGTGATTAAGACATGGGATATGCAGGTGGTAGTTTTTTTGTGGGTTATGATACTTGCTGTAAGGAAGGTTTACCGTGATATGGTAGGAAGTGCCTATTATGTTGCTCCTGAGGTATTGCGTCGTAGTTATGGAAAAGAAATAGATATTTGGAGTGCAGGCATAATATTGTATATTCTCCTTAGCGGTGTACCTCCTTTTTGGGCTGAAACTGAGAAGGGAATATTTGATGCCATATTGGAAGGTAAAATTGACTTTGAAAGTCAACCATGGCCATCAATATCAGATAGTGCTAAAGATTTAGTCAGGAAAATGTTGACACAGGACCCAAAGAAGCGAATTACTTCTGCAGAAGTTCTCGAACACCCGTGGATAAGAGAAGGTGGAGAGGCGTCAGATAAGCCAATTGATAGTGCAGTTCTGTCAAGAATGAAACAACTCAGGGCAATGAATAAGCTCAAGAAGCTCGCATTGAAGGTTATTGCTGAAAATCTCTCTGAAGAAGAGATTAAAGGACTCAAAGCAATGTTCACAAACATGGACACCGACAGTAGTGGAACTATCACCTATGAAGAACTGAAGACAGGCTTGGCCCGGATTGGATCGCAACTGTCTGAGGCTGAAGTGAAGCAACTCATGGAAGCTGCTGATGTTGATGGGAATGGGTCGATTGACTATATCGAATTCATCTCAGCCACAATGCATAGGCACAGACTCGAACGAGATGAGCACCTATTCAAAGCATTTCAGTATTTTGACAAGGATAACAGTGGATATATTACTAGAGATGAATTGGAGACTGCTATGACACAACACGGAATGGGCGATGAAGCGACCATTAAGGAAATAATATCTGAGGTGGATGCCGATAATGATGGTAGAATAAACTATGAGGAATTTTGCGCAATGATGAGGAGTGGAATGCAACACCAAGGACCTCTGTTCTAA 1734 0.4296 MGCHSSKEKKSKPEFSGKGSSTGSGGVNSATHQSYHSVQPPATQIHTSEPKPQPNPPAAAEIAAQKPAVRNVRAALQQKAEAATILGKPLEDVKNFYTLGKELGRGQFGITYLCTENSTGRTYACKSILKRKLVSKADKDDMRREIQIMQHLSGQPNIVEFKGTYEDRYSVHLIMELCAGGELFDRIIAQGHYSERAAASICRAIVNVVHICHFMGVMHRDLKPENFLLSSKDEDATLKATDFGLSVFIEEDLKAAITGYGNLVIKTWDMQVVVFLWVMILAVRKVYRDMVGSAYYVAPEVLRRSYGKEIDIWSAGIILYILLSGVPPFWAETEKGIFDAILEGKIDFESQPWPSISDSAKDLVRKMLTQDPKKRITSAEVLEHPWIREGGEASDKPIDSAVLSRMKQLRAMNKLKKLALKVIAENLSEEEIKGLKAMFTNMDTDSSGTITYEELKTGLARIGSQLSEAEVKQLMEAADVDGNGSIDYIEFISATMHRHRLERDEHLFKAFQYFDKDNSGYITRDELETAMTQHGMGDEATIKEIISEVDADNDGRINYEEFCAMMRSGMQHQGPLF 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g0390 577 ProSiteProfiles EF-hand calcium-binding domain profile. 502 537 IPR002048 GO:0005509
Sto2g0390 577 CDD STKc_CAMK 96 386 - -
Sto2g0390 577 CDD EFh_PI-PLC 435 568 - -
Sto2g0390 577 CDD EFh 506 567 IPR002048 GO:0005509
Sto2g0390 577 ProSitePatterns EF-hand calcium-binding domain. 479 491 IPR018247 -
Sto2g0390 577 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 21-RELATED 266 571 - -
Sto2g0390 577 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 21-RELATED 58 252 - -
Sto2g0390 577 SMART efh_1 470 498 IPR002048 GO:0005509
Sto2g0390 577 SMART efh_1 506 534 IPR002048 GO:0005509
Sto2g0390 577 SMART efh_1 434 462 IPR002048 GO:0005509
Sto2g0390 577 SMART efh_1 541 569 IPR002048 GO:0005509
Sto2g0390 577 SMART serkin_6 97 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto2g0390 577 SUPERFAMILY EF-hand 426 566 IPR011992 -
Sto2g0390 577 MobiDBLite consensus disorder prediction 1 15 - -
Sto2g0390 577 ProSitePatterns Protein kinases ATP-binding region signature. 103 130 IPR017441 GO:0005524
Sto2g0390 577 ProSiteProfiles Protein kinase domain profile. 97 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto2g0390 577 ProSitePatterns EF-hand calcium-binding domain. 515 527 IPR018247 -
Sto2g0390 577 Gene3D Phosphorylase Kinase; domain 1 99 182 - -
Sto2g0390 577 Pfam EF-hand domain pair 435 495 IPR002048 GO:0005509
Sto2g0390 577 Pfam EF-hand domain pair 505 567 IPR002048 GO:0005509
Sto2g0390 577 MobiDBLite consensus disorder prediction 16 49 - -
Sto2g0390 577 ProSiteProfiles EF-hand calcium-binding domain profile. 430 465 IPR002048 GO:0005509
Sto2g0390 577 ProSiteProfiles EF-hand calcium-binding domain profile. 466 501 IPR002048 GO:0005509
Sto2g0390 577 Pfam Protein kinase domain 97 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto2g0390 577 SUPERFAMILY Protein kinase-like (PK-like) 95 395 IPR011009 -
Sto2g0390 577 PANTHER SERINE/THREONINE-PROTEIN KINASE 58 252 - -
Sto2g0390 577 PANTHER SERINE/THREONINE-PROTEIN KINASE 266 571 - -
Sto2g0390 577 ProSitePatterns EF-hand calcium-binding domain. 443 455 IPR018247 -
Sto2g0390 577 ProSiteProfiles EF-hand calcium-binding domain profile. 538 572 IPR002048 GO:0005509
Sto2g0390 577 Gene3D Transferase(Phosphotransferase) domain 1 183 394 - -
Sto2g0390 577 MobiDBLite consensus disorder prediction 1 59 - -
Sto2g0390 577 ProSitePatterns EF-hand calcium-binding domain. 550 562 IPR018247 -
Sto2g0390 577 Gene3D - 395 572 - -
Sto2g0390 577 ProSitePatterns Serine/Threonine protein kinases active-site signature. 217 229 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g0390 Sto-Chr2 3370449 3374467 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g0390 3 577 EF-hand Containing Proteins AT3G20410 69.257 0.0 809
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Sto2g0390 Pkinase 8.8e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g0390 K13412 - gmx:100816859 859.366