Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g0388 aTGAAGGATGCGCATTTACCAGCGACGAGTTGTAGAGGTACTAGAATTGGGGCAGAATTTCTGGTGCGAATGAATACGTCGTCGTCGTCGAAGAACTTGAGGTTGAAGGTTCAAGACGTTGTCGTTTCCCACCCTGCTTGCTTTTTTGGCTGTGGCACGTGTGGGTACGAGCTAAACCTGACCTCCTCTAACCGGAACACTTCAACCATTGGTTCTAAATACGGGAAATCCATAAAGCGAGAGATGATAGCTGAGGAAGAGGAGGCTACTAAGCTGGAATTTTCTGAAGATGAGGAGGCACTTATTGCCAGGATGTTTAGCTTGGTTGGAGAgaggtggtcTCTTATTGCTGGGAGAATTCCAGGAAGGAGTGCAGAAGAGATTGAGAAGTATTGGACTTCAATGTGCACTTCATCAAGTGAATGA 426 0.4507 MKDAHLPATSCRGTRIGAEFLVRMNTSSSSKNLRLKVQDVVVSHPACFFGCGTCGYELNLTSSNRNTSTIGSKYGKSIKREMIAEEEEATKLEFSEDEEALIARMFSLVGERWSLIAGRIPGRSAEEIEKYWTSMCTSSSE 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g0388 141 Pfam Myb-like DNA-binding domain 93 133 IPR001005 -
Sto2g0388 141 ProSiteProfiles Myb-like domain profile. 86 136 IPR001005 -
Sto2g0388 141 CDD SANT 93 135 IPR001005 -
Sto2g0388 141 SUPERFAMILY Homeodomain-like 93 135 IPR009057 -
Sto2g0388 141 Gene3D - 93 141 - -
Sto2g0388 141 SMART sant 90 138 IPR001005 -
Sto2g0388 141 PANTHER AND CPC, PUTATIVE-RELATED 83 140 - -
Sto2g0388 141 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 83 140 - -
Sto2g0388 141 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 86 140 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g0388 Sto-Chr2 3333646 3348350 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g0388 94 134 MYB Transcription Factor Family AT5G35550 58.537 7.56e-12 59.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sto2g0388 Myb_DNA-binding 2.6e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g0388 - - hbr:110633185 94.3597