Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g0377 atggagaagaagaatacttataattcttcttcttctgaaatGAGAGTTTGCCGGCGGCGTTACGATGGTCGCGTGCCGGAGATAAGCTTCAAATCGCCGGCGGTTAGGCCCTATGTTCGATCGAAAACGCCTCGCCTTCGATGGACTCCTGATCTTCATCACTGTTTTGTGCATGCAGTTCAAAGGCTTGGTGGAGAAGACAGGGCTACACCAAAGTTGGTTTTACAGCTAATGAATGTGAAGGGGCTCACAATCTCTCATGTTAAAAGTCACCTTCAGGTACTCTtcagaaaatga 297 0.4141 MEKKNTYNSSSSEMRVCRRRYDGRVPEISFKSPAVRPYVRSKTPRLRWTPDLHHCFVHAVQRLGGEDRATPKLVLQLMNVKGLTISHVKSHLQVLFRK 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g0377 98 PANTHER MYB-LIKE HTH TRANSCRIPTIONAL REGULATOR FAMILY PROTEIN 6 93 - -
Sto2g0377 98 Gene3D - 43 98 - -
Sto2g0377 98 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 40 98 IPR017930 -
Sto2g0377 98 SUPERFAMILY Homeodomain-like 41 96 IPR009057 -
Sto2g0377 98 Pfam Myb-like DNA-binding domain 46 95 IPR001005 -
Sto2g0377 98 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 6 93 IPR044848 GO:0003700
Sto2g0377 98 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 44 97 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g0377 Sto-Chr2 3221572 3222402 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g0377 14 94 G2-like Transcription Factor Family AT1G14600 62.963 8.27e-29 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Sto2g0377 Myb_DNA-binding 7.3e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g0377 - - dzi:111280274 149.828