Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g0367 ATGGACAAAGGATGGGGTCTCGCTCTTGATTCTTCCTCCAATCGCACTACTACCATGTTTCCCACTCTAGGCTTCCCCGTCAATCTCTCCCGATCCTCCGCTGACTccgatcatcatcatcacaacCGCGTCGTCCCCGGCGAAGTCGACTTCTTCTCCGATCGAAACAGGCCGGCTTCCGATCATCATCAAGATGTTAAATCCAATATCACTGTGAAAAAGGAGATTTCTCTTGGTGAACCGCCTCATTTAGATCATGTAAATACTGGTTTACAACTGTTGACTGCTAACACTGGAAGCGATCAATCTACGGTGGATGATGGAGTTTCCTCAGATGCTGAAGATAAGCGAGCCAAGACTACTACTGAGCTGGCACAATTGCAAGAGGAGCTCCAAAGGATGAATGCAGAAAACCAGAAGCTGCGGGACATGCTGAACCACGTGAGCAGTAATTACACGGCTTTGCAATTGCATTTCGTCACATTAATGCAACAGCAACAACACATTCAACGCACCCACACCACCACCGAACATGAGGTTGTTGAAGCTAAAACGGAGGACAAAAGAGAGATAGTGGCAATGCCATTACTGGAATTAGGACCCAGCGGAACCacagaagtagaaaataataacAACGAAGTATCCAATTCCTCATCGGATGAGAGGACACGATCTACCACTCCGCCTCAAAACAACAATAATGGTAAAAACCGAGAAGAAAGTCCAGAGTCAGAGGATGTTCAGGCACACAAGCTTCAGAAACTCAACCCCTCATCAAACTCCATGGACCAATCCACCACCACTACTACTACCGCTGAAGCCACCATGCGAAAAGCTCGCGTCTCCATCAGTGATGGGTGCCAATGGAGAAAATATGGACAAAAGATGGCAAAAGGAAACCCGTGTCCTCGCGCCTACTATAGATGTACTATGGCGGTGGGGTGTCCAGTTCGCAAACAAGTACAACGCTGTGCGGAGGACAGGACGATTTTGATAACAACTTATGAAGGAGCCCATAACCACCCTTTGCCACCGGCGGCGATGGCGATGGCGTCGACCACCACGGCGGCGGCGAGTATGTTGCTGTCGGGGTCGATGTCGAGTGGGGACGGTGGGTTGATGAACCCCAACTTGCTAGCCAGGGCTATACTTCCTTGCTCCACTAGCATGGCTACGCTTTCTGCTTCTGCGCCATTTCCTACCATAACATTGGATCTCACTCACACAGCAtccaatactaataataataataataacggaGGCTTGCAATTCCAGAGACCGCCATTTCAGCAAGTGGCGCAACAAACACCGTCGGCTCAGCAGCAGTTGAGTCACGCATTTTCACAAGCACTTTACAATCAATCCAAGTTCTCGGGACTTCAGTTATCCACCACTCAGGATTTGGGCTTATCTTCTTCTTTACAACAACACCAATCTGCTCCTGCTGCTGTCGCTCCTAGGCCGGTGCTGCCGGTTCAGCCGAGCCAACATCCGGTTGACCCGGTCAGCGCAGCCACCGCGGCCATCACTGCCGACCCCAATTTCACGGCGGCGCTCGCGGCTGCTATCTCCTCCATCATTAGCGGCGGCGGTGCTCAttcaaacaacaacaacaacaatagtaGCAGCAGCAATCCCAACATCACCAATGGCGCCACCACCATCAGCAGTTTCTCtgggaattaa 1686 0.4828 MDKGWGLALDSSSNRTTTMFPTLGFPVNLSRSSADSDHHHHNRVVPGEVDFFSDRNRPASDHHQDVKSNITVKKEISLGEPPHLDHVNTGLQLLTANTGSDQSTVDDGVSSDAEDKRAKTTTELAQLQEELQRMNAENQKLRDMLNHVSSNYTALQLHFVTLMQQQQHIQRTHTTTEHEVVEAKTEDKREIVAMPLLELGPSGTTEVENNNNEVSNSSSDERTRSTTPPQNNNNGKNREESPESEDVQAHKLQKLNPSSNSMDQSTTTTTTAEATMRKARVSISDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDRTILITTYEGAHNHPLPPAAMAMASTTTAAASMLLSGSMSSGDGGLMNPNLLARAILPCSTSMATLSASAPFPTITLDLTHTASNTNNNNNNGGLQFQRPPFQQVAQQTPSAQQQLSHAFSQALYNQSKFSGLQLSTTQDLGLSSSLQQHQSAPAAVAPRPVLPVQPSQHPVDPVSAATAAITADPNFTAALAAAISSIISGGGAHSNNNNNNSSSSNPNITNGATTISSFSGN 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g0367 561 Gene3D WRKY domain 267 345 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto2g0367 561 MobiDBLite consensus disorder prediction 198 276 - -
Sto2g0367 561 MobiDBLite consensus disorder prediction 203 237 - -
Sto2g0367 561 PANTHER WRKY TRANSCRIPTION FACTOR 6 15 540 - -
Sto2g0367 561 MobiDBLite consensus disorder prediction 479 499 - -
Sto2g0367 561 ProSiteProfiles WRKY domain profile. 278 344 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto2g0367 561 SUPERFAMILY WRKY DNA-binding domain 281 344 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto2g0367 561 MobiDBLite consensus disorder prediction 537 561 - -
Sto2g0367 561 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 15 540 IPR044810 GO:0003700
Sto2g0367 561 Coils Coil 110 151 - -
Sto2g0367 561 SMART WRKY_cls 283 343 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto2g0367 561 Pfam WRKY DNA -binding domain 285 342 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto2g0367 561 MobiDBLite consensus disorder prediction 98 117 - -
Sto2g0367 561 MobiDBLite consensus disorder prediction 251 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g0367 Sto-Chr2 3128487 3130807 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g0367 1 539 WRKY Transcription Factor Family AT1G62300 49.670 1.24e-147 434
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sto2g0367 WRKY 6.6e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g0367 - - gmx:100802124 518.079