Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g0357 TTGGCAGATAAATTTTCTCGAGAGTTTATTCGTCTGTCGGAGTATCGGTttatcctctctctctctctcacccaCAGATCTAAACCCAAAGTAAAAATGGAGGTAGATTACTCACATGCTTTTGAGGTTTCAAAGAAGAGAAAGATTCAAGAGAGACATAAATATAATCCAATggaggaagacgaagatgacATTCCGTTGCCTTCAAAGAAGAGTGCTAAACTTTCATGCAAGAAAGGGGATGAACCTAAGAAATTTCCTGCTGCATCAGAAACGAAGAGAAGTTTCCAAAACGATTTCTTGGTTGACaattttgaagaagaagatgttGATGATGAGGAAGCCTTGGTTTGGTGGAAGTTTAGGTCCAGAAGAAGAACTCAGAGAATGGATATTATAATGAGAAAAGAATGCTCAGAATCAAGCGGAGAAAGTCCACACTCAAACAAAACCAATTTGCATTCTCCACCAGCTTCCTCATCTTCTGATTCAAAAAACCATACTAAGGACAATGACAGTGCTACAAGTATGAAGGGTACTAAAAAAAGAGCTTGCTTGACATGCCATCAATGCATGAAAAAGGAGAGAAGAATTTTTGTCCCTTGCACTAAATGTGAACAGAAATTGTACTGTATTCAGTGCATCAAGCAATGGTATCCTGATATGTCAGAAGAAGAAATTGCAGATAGTTGTCCATCTTGCCGTAACAACTGCAATTGCAATGTTTGCTTGCGTTCAAGTGGGATGATTAAGACATCTATGAGGGACATCACTGATTATGAGAAGTTCCAGTATCTGCAATATTTAATCAACTTAATCCATCCATTTCTGAAACAAATTTGTGAAGAACAGGCTCTAGAGGAAGAGATTGAAGCTAGAATACAAGGAAAACCATGGTATTTGATTAAGGTACAACAAACTCTTTGTGGAGGGGATGAGCGTGTCTAttgCGACCATTGTGCTACTTCTATTGTTGATCTCCATCGAAGCTGCCCTGAGTGTTCCTATGAACTCTGCCTCCAATGTTGCCAAGAAGTTCGCAATGGAACTATTTCACCCCGGGATGAGATGAAGTTTCAATATGTGAATAAGGGTTATGATTATATGCATGGTGGTGATCCTCTGCCACTGTCCGGTAATTCCGAGACTTTAGGCAATCATCTTACTGACCTATCTACTCTGTGGACTGCTAAAAGCAATGGAAGTGTTTGTTGTGCCCCAAAAGAGGTTGGGGGCTGTGGAAGTTGCCAGTTGGAGCTCAAGCACATTCTTCCAAGGGGTTGGATACGTGACTTGGAAGCTAAAGCTCGTGATTGGGTAAGAATGTGCAAAACTGAACAAGCTCCTCTTAAGCAGGAGGATGCTGCAGCATCAAGCTGCTGCAACTCTATGAGAAGAGCAGCTTCAAGGGACAGCCTTGATGACAACCACATATACTGTCCTTCAGGGGACATTTTAAGTGAAGGGCTATCTCTCTTCCGAAAGCATTGGACTAACGGTCAACCTGTTATAGTTCGTGATGTTCTTCAACAAGCAACAGGTTTGAGTTGGGAGCCGATGGTTATCTGGCGGGCTGTATGTGAAACTTTGGATTCAAGAATCAACATGAAAATGTCAGAAGTGAAGGCCATTGATTGCCTTGCTGGCTGTGAGGTAGAAATCAACACTCGTAAGTTCTTTAAAGGTTACATGGAGGGAAGAACATATAGTAACCTCTGGCCGGAGATGCTCAAACTAAAAGACTGGCCTCCCTCTGATAAGTTTGAAGATCTTTTACCTCGCCACTGTGATGAGTTTATCCGGTCCTTGCCATTCCAAGAGTACACGGACCCTCGGGCTGGAATCTTCAATCTTGCGGCCAAGTTGCCAATGCATGTCATGAAACCTGACATGGGTCCAAAAACATACATTGCTTATGGAGTCAAAGAAGAACTTGGCAGAGGAGATTCTGTAACAAAGCTTCATTGTGATATGTCGGATGCAGTGAATATTTTGACCCATACTGCTGATGTAGAGTTGAATGGTGAGCAACGCATGTCtattttaaacttgaaaaaagcACACAAGGCCCAAGATGAGATAGAGCGAAAGCTAGAAGATAAAGAAGTCTTAGAGCTTACAGACACAGAGAAGTGCTTTGCTGCAACCAATGGAGACATCTCTCCCAATTTTGAGGCATTCGAGGCACCTAATTTTGAGGCATGCGAGGCAGGTGCCGCCCTTTGGGACATCTTCCGAAGAGAAGATACTGAGAAGTTGGAAACATATCTAAGAAATCACTCAAAAGAGTTCAGACATACTTACTGTTGTCCAGTTGAAGAGGTTGTCCATCCAATTCATGACCAATGTTTTTATTTAACATTGGAGCACAAGAAGAAACTGAAGGAGGAATTTGGAGTTGAACCATGGACATTTGAGCAGAAACTTGGGGAGGCAGTGTTTATTCCTGCTGGATGCCCTCACCAAGTCAGAAATCTTaagTCATGCACAAAGGTTGCTGTAGACTTTGTGTCACCGGAAAATCTTCATGAGTGTCTGCGTTTAACAAATCAGTTCCGTCAGCTTCCCAAGAACCACAAGGCCAGAGAAGATAAACTTGAGATAAAGAAGATGATAGTCTATGCTGCTGACCAAACTCTGACAGATTTAGAATCCTTACTACTGAAGTGTTCATCTTGA 2679 0.4072 LADKFSREFIRLSEYRFILSLSLTHRSKPKVKMEVDYSHAFEVSKKRKIQERHKYNPMEEDEDDIPLPSKKSAKLSCKKGDEPKKFPAASETKRSFQNDFLVDNFEEEDVDDEEALVWWKFRSRRRTQRMDIIMRKECSESSGESPHSNKTNLHSPPASSSSDSKNHTKDNDSATSMKGTKKRACLTCHQCMKKERRIFVPCTKCEQKLYCIQCIKQWYPDMSEEEIADSCPSCRNNCNCNVCLRSSGMIKTSMRDITDYEKFQYLQYLINLIHPFLKQICEEQALEEEIEARIQGKPWYLIKVQQTLCGGDERVYCDHCATSIVDLHRSCPECSYELCLQCCQEVRNGTISPRDEMKFQYVNKGYDYMHGGDPLPLSGNSETLGNHLTDLSTLWTAKSNGSVCCAPKEVGGCGSCQLELKHILPRGWIRDLEAKARDWVRMCKTEQAPLKQEDAAASSCCNSMRRAASRDSLDDNHIYCPSGDILSEGLSLFRKHWTNGQPVIVRDVLQQATGLSWEPMVIWRAVCETLDSRINMKMSEVKAIDCLAGCEVEINTRKFFKGYMEGRTYSNLWPEMLKLKDWPPSDKFEDLLPRHCDEFIRSLPFQEYTDPRAGIFNLAAKLPMHVMKPDMGPKTYIAYGVKEELGRGDSVTKLHCDMSDAVNILTHTADVELNGEQRMSILNLKKAHKAQDEIERKLEDKEVLELTDTEKCFAATNGDISPNFEAFEAPNFEACEAGAALWDIFRREDTEKLETYLRNHSKEFRHTYCCPVEEVVHPIHDQCFYLTLEHKKKLKEEFGVEPWTFEQKLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPENLHECLRLTNQFRQLPKNHKAREDKLEIKKMIVYAADQTLTDLESLLLKCSS 892
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g0357 892 CDD cupin_RmlC-like 777 837 - -
Sto2g0357 892 MobiDBLite consensus disorder prediction 48 91 - -
Sto2g0357 892 MobiDBLite consensus disorder prediction 137 176 - -
Sto2g0357 892 Pfam JmjC domain, hydroxylase 739 836 IPR003347 -
Sto2g0357 892 SMART cupin_9 592 853 IPR003347 -
Sto2g0357 892 Gene3D Cupin 472 862 - -
Sto2g0357 892 MobiDBLite consensus disorder prediction 48 89 - -
Sto2g0357 892 Pfam Zinc-finger domain of monoamine-oxidase A repressor R1 182 253 IPR018866 -
Sto2g0357 892 SUPERFAMILY Clavaminate synthase-like 492 874 - -
Sto2g0357 892 PANTHER LYSINE-SPECIFIC DEMETHYLASE JMJ25-LIKE 30 887 - -
Sto2g0357 892 ProSiteProfiles JmjC domain profile. 611 853 IPR003347 -
Sto2g0357 892 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 30 887 IPR045109 GO:0032454|GO:0033169
Sto2g0357 892 Coils Coil 684 707 - -
Sto2g0357 892 MobiDBLite consensus disorder prediction 144 164 - -
Sto2g0357 892 ProSiteProfiles Zinc finger RING-type profile. 185 235 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g0357 Sto-Chr2 3049688 3054174 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Sto2g0357 JmjC 8.2e-14 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g0357 K15601 K21989 gmx:100797860 1033.48