Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g0353 ATGGCTAACACCCGTTTGGCCTTTCCTCTTCATCTCACTCAGTTCTTATCAATCACTTTGATCTTTGCTTTGCTGCCTCTTGTTCTCTCCAACACTGACCCTTCTGATGTTCAAGCACTTCAGATTTTGTACAATGCATTTAATAGTCCATCGCAGCTAGCCGGCTGGAAAATCAGCGGTGGTGATCCATGTGGAGAGTCATGGAAAGGGATTGTGTGTGAGGGTTCCACCGTTGTTTCCATTAAGAtctcaggtttagggttaaatgGGACTATGGGATATCTGCTTTCAAACCTCATGTCACTCAAAGAGCTTGACTTAAGTGACAACAAGATTGCTGACACAATTCCCTACCAGTTACCACCTAATCTTACAAGCctGAATATTGCAAGAAATAGCATAAGTGGAAATCTTCCTTACTCGATTTCCGCCATGGCTTCTCTCAATTATCTGAATGTTAGCCATAATGTACTGTCCATGACAACTGGAGAAGTTTTTTCTAATCTTTCCAAACTTGATATCCTGGATCTATCATTCAATAACTTCTCCGGTGATCTTCCTAGTTCTTTTGGTTCATTGTCCAATCTTTCTTCTCTCTTCTTGCAGAACAATCAGTTTAGTGGGTCGCTCAATGCTCTTGTTCGTTTGCCCTTGAAAGCATTAAATGTTGCAAACAACAATTTTAGTGGATCGATACCTCGTGAGCTTATTTCTATCCCAAATTCCATATTTGATGGAAATTCTTTTGACAATGGTCCTGCTCCTCCTCTGCTACCACATGCACCTTCTCCACCctctcataataataataataataataataatcaccaTTCTGGTTCTGATTCACATAAAACAAAAGGTTCTGATATTGAAAATTATGATGGCCATAAGGGTTTGACAACCGGGGCTATTGTAGGCATCATATTGGCTTCGGTGCTTCTGGCTGTTATTATGGCACTTGCTCTTGTTTTCTATGTCCGAAAGCGACAAAGGAAGGAAAAAGGTGCAAAAACTTTTAGTGGGAGTCTTCCTCTTGGAACTAATAATGTAACTCCTCCAATGCAAGAACCTGGGGTAAAAAGTGCTGCTATAATTACTAATCTCAAGCTTCCCCCTGCCGAAAAAGTTATCATTGAGAAGGTACCTGCAAAAAATGGAGATGTAAAGCAGATGAATTCCCCTATTACTGCTACGCCATACACAGTTGCTTCTCTCCAAAGTGCAACGAATAGCTTTAGTCAAGAGTTTCTTATTGGTGAAGGTTCTATTGGTCGAGTTTACAAGGCTGATTTTCCTAATGGGAAGATCATGGCCATTAAGAAAATTGACAATGCAGCACTGTCATTACAAGAGGAAGACAACTTTCTTGAAGCTGTTTCAAACATGTCACGCTTGCGGCATCCAAACGTTGTTACATTGGCTGGATATTGTGCAGAGCACGGGCAACGTCTTCTAGTTCATGAGTACATAGCAAATGGAAATTTACATGATATGCTCCATTTTGTTGAAGATAGCAGCAAGGCTTTATCTTGGAATGCTCGTGTCCGGATAGCACTTGGCACAGCCCGGGCTTTAGAGTACTTGCATGAAGTATGTGTGCCTTCTGTTGTACATAGAAACTTCAAATCGGCAAATATATTACTTGATGAGGAGCTCAATCCTCACCTGTCTGACTGTGGCTTAGCTGCTCTAACACCAAACACGGAGCGGCAGGTTTCAACTCAGATGGTTGGCTCATTTGGTTATAGTGCCCCAGAGTTTGCATTATCAGGAATGTATACAGTAAAAAGTGATGTTTATAGCTTTGGGGTGGTAATGTTGGAGCTATTGACCGGTCGGAAGCCACTCGACAGTTCACGGGTCAGATCGGAGCAGTCACTTGTGAGGTGGGCAACTCCTCAACTCCACGATATAGATGCCTTGGCCAAAATGGTTGATCCTGCTATGAACGGCATGTATCCTGCAAAGTCATTATCACGCTTCGCCGATATCATTGCGCTGTGTGTTCAGCCGGAGCCGGAATTTCGACCTCCCATGTCCGAGGTGGTACAAGCATTGGTACGGTTAGTGCAAAGAGCAACCGCGGTTAAACGGCGTTCCAGTGATGAATTTGGTTTTGGTGGTCACAAGACCCCAGATTATGAGGCCATAGACATGTCTTTTTAA 2166 0.4187 MANTRLAFPLHLTQFLSITLIFALLPLVLSNTDPSDVQALQILYNAFNSPSQLAGWKISGGDPCGESWKGIVCEGSTVVSIKISGLGLNGTMGYLLSNLMSLKELDLSDNKIADTIPYQLPPNLTSLNIARNSISGNLPYSISAMASLNYLNVSHNVLSMTTGEVFSNLSKLDILDLSFNNFSGDLPSSFGSLSNLSSLFLQNNQFSGSLNALVRLPLKALNVANNNFSGSIPRELISIPNSIFDGNSFDNGPAPPLLPHAPSPPSHNNNNNNNNHHSGSDSHKTKGSDIENYDGHKGLTTGAIVGIILASVLLAVIMALALVFYVRKRQRKEKGAKTFSGSLPLGTNNVTPPMQEPGVKSAAIITNLKLPPAEKVIIEKVPAKNGDVKQMNSPITATPYTVASLQSATNSFSQEFLIGEGSIGRVYKADFPNGKIMAIKKIDNAALSLQEEDNFLEAVSNMSRLRHPNVVTLAGYCAEHGQRLLVHEYIANGNLHDMLHFVEDSSKALSWNARVRIALGTARALEYLHEVCVPSVVHRNFKSANILLDEELNPHLSDCGLAALTPNTERQVSTQMVGSFGYSAPEFALSGMYTVKSDVYSFGVVMLELLTGRKPLDSSRVRSEQSLVRWATPQLHDIDALAKMVDPAMNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRATAVKRRSSDEFGFGGHKTPDYEAIDMSF 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g0353 721 Gene3D Ribonuclease Inhibitor 33 295 IPR032675 -
Sto2g0353 721 Gene3D Transferase(Phosphotransferase) domain 1 490 707 - -
Sto2g0353 721 Pfam Leucine rich repeat 122 182 IPR001611 GO:0005515
Sto2g0353 721 Gene3D Phosphorylase Kinase; domain 1 375 489 - -
Sto2g0353 721 SUPERFAMILY L domain-like 32 241 - -
Sto2g0353 721 SMART serkin_6 412 687 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto2g0353 721 MobiDBLite consensus disorder prediction 253 290 - -
Sto2g0353 721 PANTHER OS01G0253100 PROTEIN 30 716 IPR045271 GO:0004714|GO:0006468
Sto2g0353 721 CDD STKc_IRAK 418 689 - -
Sto2g0353 721 ProSiteProfiles Protein kinase domain profile. 412 689 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto2g0353 721 MobiDBLite consensus disorder prediction 264 278 - -
Sto2g0353 721 Pfam Leucine rich repeat N-terminal domain 34 73 IPR013210 -
Sto2g0353 721 SMART LRR_typ_2 99 127 IPR003591 -
Sto2g0353 721 SMART LRR_typ_2 193 216 IPR003591 -
Sto2g0353 721 SMART LRR_typ_2 169 192 IPR003591 -
Sto2g0353 721 SMART LRR_typ_2 145 168 IPR003591 -
Sto2g0353 721 Pfam Protein kinase domain 415 684 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto2g0353 721 Pfam Leucine Rich repeat 99 115 IPR001611 GO:0005515
Sto2g0353 721 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 8 30 716 - -
Sto2g0353 721 SUPERFAMILY Protein kinase-like (PK-like) 389 686 IPR011009 -
Sto2g0353 721 ProSiteProfiles Leucine-rich repeat profile. 101 122 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g0353 Sto-Chr2 3013946 3019267 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g0353 145 721 Strubbelig Receptor Gene Family AT4G22130 67.993 0.0 771
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Sto2g0353 Pkinase 3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g0353 - - aprc:113869285 1066.6