Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g0301 ATGGTTTCTCTGGAGGATTCTCACTCTACTTCCAATCGTTTCCCTTTAACCCGAACTAGCTATTACTCTGCTACTACCTCTTCTGCCAACAATTCTTCCTCCAAAATTCACCGACACATCGGCAGGTCCATGCGAACTATACGCTCTAATTTCTTCCAGGATGACCATAGTTGCTCCTTTACCGCATCCGTCACCGAGAAATCCACATGCTTATCGGAAAACATGACCGATTCCGTCATCGACCTCAGACTCGGCGAGCTCGCATCGCGGAACAACAAATCTGTGAAATCTTCCGCTTCCGAGGAGGAGTTGCTTGATCTTTCTCAAGCTTTCAGTGATTTCTCTGCTTGTAGTAGTGATATTTCCGGGGAGCTGCAGAGGCTGGCTTGTTTGCCGTCGCCGGAAAATGTACCGAAGAACGACGGTGGTAGCGGTGAAGTGGAGCAGGAGGCAGAGCCGGAGCCATGCCAGGGGTTTCTGCAGCGAGAGAATTTCTCTACTGAGATTATTGAGAGTATTTCGCCGGAGGATCTTCAGCCGACGGTGAAGATCTGCATCGACGGGTTACAGTCACCATCGGTTGCTGTGAAGCGGTCGGCTGCGGCTAAGCTCAGACTGTTGGCGAAGAACCGCGCGGATAATCGAGCTCTGATTGGTGAGTCCGGTGCGGTTCCAGCTCTGGTTCCGCTGCTTCGGTGCAGTGATCCGTGGACGCAAGAACACGCCGTGACGGCCTTGCTGAATCTCTCCCTACACGAAGATAACAAGATGCTGATAACCAATGCTGGAGCTATAAAGTCACTGATTTATGTGCTTAAAACCGGGACGGAGACTTCGAAGCAGAACGCGGCATGTGCGCTTTTAAGCCTCGCCTTGGTAGAAGAAAACAAGAGCTCTATTGGGGCTAGTGGAGCAATTCCACCGCTCGTTTCCTTGCTATTAACTGGTTCTAGCAGGGGAAAGAAGGACGCTCTGACGACACTCTATAAGCTCTGCTCTATAAAGCCGAACAAGGAGAGGGCTGTGAGTGCTGGAGCCGTGAAGCCGCTAGTGGAGATGGTGGCAGAGCAAGGAACGGGTATGGCTGAGAAGGCAATGGTGATACTTAATAGCTTGTCAGGGATTCAGGAAGGGAAGGAAGCAATTGTGGAAGAAGGGGGAATAGCTGCTCTTGTGGAGGCAATTGAAGATGGGTCTGTGAAGGGAAAGGAATTTGCTGTTTTGACACTTTTACAGCTATGTGCCGACAATGTGAGGAATAGAGGATTGCTTGTGAGGGAGGGTGGGATACCCCCTCTGGTTGCTCTTTCCCAGACTGGGAGTGTTCGAGCTAAGCACAAGGCTGAAACGCTCCTTGGATACTTGAGAGAATCAAGACAAGAAGCATCTACTTCGAGTCCTTAG 1404 0.5071 MVSLEDSHSTSNRFPLTRTSYYSATTSSANNSSSKIHRHIGRSMRTIRSNFFQDDHSCSFTASVTEKSTCLSENMTDSVIDLRLGELASRNNKSVKSSASEEELLDLSQAFSDFSACSSDISGELQRLACLPSPENVPKNDGGSGEVEQEAEPEPCQGFLQRENFSTEIIESISPEDLQPTVKICIDGLQSPSVAVKRSAAAKLRLLAKNRADNRALIGESGAVPALVPLLRCSDPWTQEHAVTALLNLSLHEDNKMLITNAGAIKSLIYVLKTGTETSKQNAACALLSLALVEENKSSIGASGAIPPLVSLLLTGSSRGKKDALTTLYKLCSIKPNKERAVSAGAVKPLVEMVAEQGTGMAEKAMVILNSLSGIQEGKEAIVEEGGIAALVEAIEDGSVKGKEFAVLTLLQLCADNVRNRGLLVREGGIPPLVALSQTGSVRAKHKAETLLGYLRESRQEASTSSP 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g0301 467 MobiDBLite consensus disorder prediction 132 154 - -
Sto2g0301 467 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 222 264 IPR000225 GO:0005515
Sto2g0301 467 SUPERFAMILY ARM repeat 179 456 IPR016024 -
Sto2g0301 467 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 4-LIKE 1 463 - -
Sto2g0301 467 PANTHER U BOX DOMAIN-CONTAINING 1 463 - -
Sto2g0301 467 Gene3D - 166 465 IPR011989 -
Sto2g0301 467 SMART arm_5 417 457 IPR000225 GO:0005515
Sto2g0301 467 SMART arm_5 293 333 IPR000225 GO:0005515
Sto2g0301 467 SMART arm_5 211 251 IPR000225 GO:0005515
Sto2g0301 467 SMART arm_5 375 415 IPR000225 GO:0005515
Sto2g0301 467 SMART arm_5 252 292 IPR000225 GO:0005515
Sto2g0301 467 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 345 387 IPR000225 GO:0005515
Sto2g0301 467 Pfam Armadillo/beta-catenin-like repeat 295 333 IPR000225 GO:0005515
Sto2g0301 467 Pfam Armadillo/beta-catenin-like repeat 213 250 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g0301 Sto-Chr2 2537139 2539142 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g0301 159 460 U-box Gene Family AT2G23140 46.774 1.95e-80 260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g0301 - - cpap:110812673 723.005