Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g0289 ATGGGTCGTTCTCGTGGGAATTTTCACGCTGATGAAGACCCTAATCAAAGGTCAAGGAGGAAAAAGAATGCTGCTAGTGGGGATATTTCAGAATCTGGTGCTGGAGGTCAAGGAACAAGTGAAGGAAAAAAGGCATTGTACCATTGCAATTATTGTAACAAAGATATTACAGGAAAAATCCGTATTAAGTGTGCCATGTGCCCAGATTTTGACCTATGTATAGAGTGCTTCTCTGTTGGAGCTGAGGTGACACCCCATAAAAGCGGTCACCCTTACAGGGTTATGGACAATTTATCCTTCCCTCTCATTTGCCCAGACTGGAACGCAGATGATGAAATTCTGCTTCTGGAGGGAATTGAAATGTATGGCATGGGGAACTGGAATGAAGTTGCTGAGCATGTTGGGACAAAGAATAAAGAAGCTTGCATAGAACACTACAGGAATGTTTACTTGAACTCAGTAACCTTTCCTGTTCCGgacaTGTCTCATGTTGTTGGGAAAAACAGAAAGGAGCTACTTGCTATGGCTAAAGGGCAAGGTGATGACAAGAAAGGCATTCCTACTGGGGATTTTGGTATAAAGGAAGAATCTCCTTTTTCTCCATCTAGAGTCAaTGTTGAAGATTCTCATAAAGCTGGTATTTCTAGCCGTTTACTGTCAAACTTAAATTCAGAATCAGAATCTGGACCCTCTAGTATCACAAATAGTGCAGCTGCAGCAGCTGCTAACCAGAAAGCTTCTAATGCAGGCCGGGGTAAAAATGGTCCTGCAGTAATTAAAATGGAAGATACTCAACTAGAGAGAAATTCTGGAGGAAACAAGCCAAATTCCTCAGGAAATAAAGGTCCTTCTTTAGTAGAGTTGAGTGGTTATAATCCCAAAAGACAGGAATTTGATCCTGAATATGACAATGATGCTGAACAATTACTTGCTGAAATGGATTTTAAGGACACTGACACTGATGACGAACGGGAATTAAAACTACGTGTGTTGCGTATCTATTCGAAAAGGCTTGATGAAAGAAAGCGTAGAAAGGATTTCATACTCGAAAGAAATTTGTTATACCCAAATCCTTTCGAGAAGGATTTAACACCTGAAGAGAGGACACTATGTCGGACATATGATGTATTCATGCGCTTTCATACCAAGGAAGACCATGAGGAACTGCTTAGAACAATTATATCTGAACACAGAATTCGTAAAAGAATTAATGAGCTTAAGGAATCCCGGGCTGCCGGTTGCCGCACATCGGCCGAAGCAGATAGATATCTTGAACATAAGAGACGAAGGGAAGCCGAAGAAAGTTCTCGTAGGATGAAAGAAAGAGCTCAAGCTGGCCCAAACAATCATGGGGTTCCAAATGCATTCATGTCGTCGTCAGATTCTGCcggcaaggattcaagtgcaaGACCAGCAGGACCGGCTGGTTCTAGCTCTGCCAATGAAATGGATGCGACAGGATACCATGGATCTGATTTACTCTCTTCATCTGAGAAACGTCTGTGTCGTGATCTAAGGTTGTCTCCAGCCATGTATCTGAAGATGCAAGAGGTTCTGACTCTGCAAATACTGTGTGGCAATGTCACTGCTAAATCTGATGCTCACCATTTATTCAATATGGATACCGCAAAGATTGACTCTGTATATGAGATCCTTGTAAAGAAGGGGATTGCTCTTCCCTGA 1683 0.4147 MGRSRGNFHADEDPNQRSRRKKNAASGDISESGAGGQGTSEGKKALYHCNYCNKDITGKIRIKCAMCPDFDLCIECFSVGAEVTPHKSGHPYRVMDNLSFPLICPDWNADDEILLLEGIEMYGMGNWNEVAEHVGTKNKEACIEHYRNVYLNSVTFPVPDMSHVVGKNRKELLAMAKGQGDDKKGIPTGDFGIKEESPFSPSRVNVEDSHKAGISSRLLSNLNSESESGPSSITNSAAAAAANQKASNAGRGKNGPAVIKMEDTQLERNSGGNKPNSSGNKGPSLVELSGYNPKRQEFDPEYDNDAEQLLAEMDFKDTDTDDERELKLRVLRIYSKRLDERKRRKDFILERNLLYPNPFEKDLTPEERTLCRTYDVFMRFHTKEDHEELLRTIISEHRIRKRINELKESRAAGCRTSAEADRYLEHKRRREAEESSRRMKERAQAGPNNHGVPNAFMSSSDSAGKDSSARPAGPAGSSSANEMDATGYHGSDLLSSSEKRLCRDLRLSPAMYLKMQEVLTLQILCGNVTAKSDAHHLFNMDTAKIDSVYEILVKKGIALP 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g0289 560 Pfam Zinc finger, ZZ type 45 87 IPR000433 GO:0008270
Sto2g0289 560 MobiDBLite consensus disorder prediction 451 492 - -
Sto2g0289 560 MobiDBLite consensus disorder prediction 214 250 - -
Sto2g0289 560 MobiDBLite consensus disorder prediction 266 285 - -
Sto2g0289 560 Gene3D - 38 95 IPR043145 -
Sto2g0289 560 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 107 154 IPR017930 -
Sto2g0289 560 ProSiteProfiles SWIRM domain profile. 474 560 IPR007526 GO:0005515
Sto2g0289 560 MobiDBLite consensus disorder prediction 417 492 - -
Sto2g0289 560 MobiDBLite consensus disorder prediction 1 41 - -
Sto2g0289 560 MobiDBLite consensus disorder prediction 1 26 - -
Sto2g0289 560 Gene3D - 475 558 IPR036388 -
Sto2g0289 560 ProSiteProfiles Myb-like domain profile. 107 150 IPR001005 -
Sto2g0289 560 MobiDBLite consensus disorder prediction 417 444 - -
Sto2g0289 560 CDD ZZ_ADA2 47 95 IPR041983 -
Sto2g0289 560 ProSiteProfiles Zinc finger ZZ-type profile. 44 100 IPR000433 GO:0008270
Sto2g0289 560 CDD SANT 107 149 IPR001005 -
Sto2g0289 560 SMART sant 103 152 IPR001005 -
Sto2g0289 560 SUPERFAMILY Homeodomain-like 100 154 IPR009057 -
Sto2g0289 560 ProSiteProfiles SANT domain profile. 102 154 IPR017884 -
Sto2g0289 560 Pfam Myb-like DNA-binding domain 106 149 IPR001005 -
Sto2g0289 560 ProSitePatterns Zinc finger ZZ-type signature. 49 76 IPR000433 GO:0008270
Sto2g0289 560 Gene3D - 101 152 - -
Sto2g0289 560 MobiDBLite consensus disorder prediction 177 298 - -
Sto2g0289 560 PANTHER TRANSCRIPTIONAL ADAPTER ADA2B 1 558 IPR034318 GO:0003713|GO:0006357|GO:0035065
Sto2g0289 560 SUPERFAMILY Homeodomain-like 468 557 IPR009057 -
Sto2g0289 560 PIRSF Txn_adaptor_ADA2 34 559 IPR016827 GO:0003713|GO:0006357|GO:0035065
Sto2g0289 560 SUPERFAMILY RING/U-box 47 109 - -
Sto2g0289 560 PANTHER TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATED 1 558 - -
Sto2g0289 560 SMART zz_5 43 88 IPR000433 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g0289 Sto-Chr2 2439519 2443932 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g0289 1 557 EF-hand Containing Proteins AT3G07740 45.034 1.74e-158 462
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sto2g0289 Myb_DNA-binding 3.5e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g0289 K11314 - gmx:100815514 887.871