Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g0236 ATGGCCGACGTACCCTTGCCTACTCGCTGGTCTTTTCAGGATTTCCGATCGATTTATGATGCCAAGTTTAATGGAAAGAAAATCTTAGAGAACGGCGATAAAACGGTCAGTAATGGGAGCAATTCGGGTGCTACGTCCAATGGCAGTAATCATGCAAAAAGCACATCGGATATGGCTATCTATGAACAGTTTCAAAGCGAGGGGCAGAATTCGACTCACTCAAATGGATTTTCACCAAATAATATGGATGGAAGGCCGCAAAAGTCCTTGCTTCCATCTTTTGAATCTGCTGACATGCGTGCTTTAGGGGAGAGCTTAAGTAGGGATATCATTCGTGGGAGTCCAGATGTGAAGTGGGAGAGCATCAAGGGATTAGAGAATGCCAAACGTTTACTGAAAGAGGCTGTTGTGATGCCAATCAAGTATCCCAAGTACTTCACCGGTCTACTATCACCATGGAAAGGTATTCTTCTATTTGGCCCTCCTGGGACTGGAAAGACAATGCTTGCAAAGGCAGTTGCTACAGAGTGCAATactacattttttaatatttcagcATCATCTGTTGTCAGCAAATGGCGAGGCAACTATTGTGAATCTTGTGGATTGCCATACTGCCTAGTTGATTTGGAGGGATCATTTGCTCAACCCTCATCCTCAGGTTATGCCCTTGCCGTCTCTGATCATAGTGATGAGGTTATCTGTAGGAAGCTCAATAATGATGTTCCTGTGGCTGGTCGGTTGCATGGCTTCCAAGGTGATTCAGAGAAGCTGGTGAAGGTATTATTTGAGCTAGCTCGGCACCATGCACCCTCAACAATATTTCTTGATGAAATTGATGCAATTATTAGTCAACGCGGTGAAGCACGCAGTGAACATGAAGCAAGTAGACGGTTAAAAACGGAATTACTCATACAGATGGACGGTTTGACACGGACCAATgatcttgtttttgttttggcaGCAACAAATCTACCCTGGGAATTAGATGCAGCCATGCTTCGACGTCTGGAGAAGCGAATCCTTGTACCACTTCCAGAACCAGAGGCAAGAAGAGCTATGTTTGAGGAACTCCTTCCATCACATCCTAATGAGGATCTGATCCCCTATGATATAATGGTGGAGCAAACAGAAGGGTACTCAGGCTCGGATATCAGGTTACTGTGTAAGGAGGCAGCAATGCAGCCCTTGAGACGCCTCATGTCACAACTTGAAGAGAGACAAGAGGTAGTGCCTGAAGAAGAGTTGCCAAAAGTTGGGCCAATCAGACCGGAAGACATAGGGATGGCTTTGAAGAATACAAGGCCATCCGCTCATCTACATGCTCACAAATATGAAAAATTCAATGCTGACTATGGTAGTCAGATACTTCAATGA 1377 0.4379 MADVPLPTRWSFQDFRSIYDAKFNGKKILENGDKTVSNGSNSGATSNGSNHAKSTSDMAIYEQFQSEGQNSTHSNGFSPNNMDGRPQKSLLPSFESADMRALGESLSRDIIRGSPDVKWESIKGLENAKRLLKEAVVMPIKYPKYFTGLLSPWKGILLFGPPGTGKTMLAKAVATECNTTFFNISASSVVSKWRGNYCESCGLPYCLVDLEGSFAQPSSSGYALAVSDHSDEVICRKLNNDVPVAGRLHGFQGDSEKLVKVLFELARHHAPSTIFLDEIDAIISQRGEARSEHEASRRLKTELLIQMDGLTRTNDLVFVLAATNLPWELDAAMLRRLEKRILVPLPEPEARRAMFEELLPSHPNEDLIPYDIMVEQTEGYSGSDIRLLCKEAAMQPLRRLMSQLEERQEVVPEEELPKVGPIRPEDIGMALKNTRPSAHLHAHKYEKFNADYGSQILQ 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g0236 458 MobiDBLite consensus disorder prediction 31 54 - -
Sto2g0236 458 Gene3D - 346 434 - -
Sto2g0236 458 PANTHER KATANIN P60 ATPASE-CONTAINING SUBUNIT A-LIKE 2 ISOFORM X1 9 196 - -
Sto2g0236 458 PANTHER KATANIN P60 ATPASE-CONTAINING SUBUNIT A-LIKE 2 ISOFORM X1 250 456 - -
Sto2g0236 458 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 115 437 IPR027417 -
Sto2g0236 458 SMART AAA_5 152 347 IPR003593 -
Sto2g0236 458 Pfam ATPase family associated with various cellular activities (AAA) 156 344 IPR003959 GO:0005524|GO:0016887
Sto2g0236 458 Pfam AAA+ lid domain 374 406 IPR041569 -
Sto2g0236 458 MobiDBLite consensus disorder prediction 66 87 - -
Sto2g0236 458 CDD AAA 123 345 - -
Sto2g0236 458 PANTHER AAA DOMAIN-CONTAINING 250 456 - -
Sto2g0236 458 PANTHER AAA DOMAIN-CONTAINING 9 196 - -
Sto2g0236 458 MobiDBLite consensus disorder prediction 66 90 - -
Sto2g0236 458 MobiDBLite consensus disorder prediction 30 54 - -
Sto2g0236 458 Gene3D - 251 449 IPR027417 -
Sto2g0236 458 Gene3D - 115 196 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g0236 Sto-Chr2 1991764 1999883 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g0236 150 417 Calmodulin-binding Proteins AT3G56690 30.292 1.98e-19 89.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g0236 K07767 - gmx:100813164 554.673