Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g0229 ATGTTACTGGTAGTTCTAGTCATTTACTCAGCCTGGATTTGTCCATTTGAATTCGCCTTTCTGACTGCCAAGAAAGATGCACTATTTATCATCGATAATGTTATTGATGGCTTATTTGCCATTGACATCGTGCTGAACTTCTTTGTTGCATATCTGGATAATCACTCTTACCTCCTTATTGACGATCATAAGAGAATTGCAATCAGGTACATATCTACCTGGTTTATATTTGATGTCTGCTCAACGGCACCATTTCAGTCCATCAGCCTCCTCTTCACTAATTATAGCAGTGAGCTTTGCTTTGAACTTCTTAACATGCTTCGGCTATGGCGTCTCAGACGAGTTAGCTCTCTGTTTGCAAGACTTGAGAAGGACATCCGCTTCAATTATTTCTGGACTAGATGCACAAAGCTCATTGCTGTAACCTTGTTTGCAGTACACTGTGCTGGATGCTTTTACTATCTAATGGCAGAGAAGTACCCTGATTCCGAAAAGACCTGGATTGGTGCAATGTACCCAAATTTCAGAGAAAGGGAGACAGTAAGAGCAGCATCAGAATTTGCATCAAGGAATCATTTGCCCCGTCACATACAAGATCAAATGTTGTCGCATTTATGTTTGAGGTTTAAAACAGAAGGACTGAAGCAGCAAGAAACATTAAATGGTCTGCCAAAGGCAATTCGTTCGAGTATTGCGAATCATCTCTTCTTTCCTGTTGTGAAGGAGGCCTACCTCTTCCATGGAGTTTCCCATGACTTCCTTTTCCAATTGGTGTCAGAAATGGAAGCTGAATATTTTCCACCCAAGGAAGATGTGATACTGCAAAATGAGTCTCCTACAGACCTCTATGTGCTCGTTTCAGGGGCAGTGGTGAGCATAAGATGCTTGTTAAATGAAGGCATTCATATGCCTTCAGACATCCCAGATGCTAGTAGTGTAATGTTGAGTGTCTGGATGAAGGATCTTATTTGCTACATGGATGGGCATGATCAAGTTCTCGGGAAGTCAATTTCGGGAGAAACATTTGGAGAGATTGGCGTTTTATTCTACAGACCACAGCCTTACACAGTTCGGACTACGGAGCTCTCTCAAATTTTAAGACTTAGCAGAACTTCATTAATGAGTGCTGTACAAGCATACCCTGCAGATTCACAAATTATAATGGATAACCTTTTCAAGAGATTAAAAGGACAAGAAGGCATGAACTCCGAATATCCACATGCAGATCCTGGCATGGTTCttcaagaaaaacttgatagaggaaaaacaaaagaaagcttTTTTCATGTGCGTACAAACAATTCACCCGAAGATCCACTATTCCAGGAAGGAAGAAGGTATAGAGACCTCACAGACTCAGAGGTCCAATTGAACAAGATGACAACTGAGGATAGTGAGAGAGATATTCACTCTGCTGCATTTAAAGGGTATCAAGAGATGGTTGATATTCTACTTGAAAGAGATGCAAATGCAAGGAATCCAAATTTCATAGGATGGACACCAAAAACTCTGGTAGAACAGCAGGATAAAGAAAGCACTGCTAACCTCTTAATTAATCATGAAAATGGGGGAAAATTAGATGAATATAGAATAGAATTAGAGACCCCAGAAATTCTTAACCGCATTAGAAAAGACGCAACCCAAAACAGAAGACACAATGATCCAAGATCTATCAACTGTCCATTAGAGAATGTATACAAAAACTCCTATTCCAGTAATCCTAAATGTCCAAGTAATAGAGAAGTGGCAAGATGCACCAAGAAGAGAGTTACGATTCACTTGCTAGGCCAATGCAGGAGTACCTCAAAGGGACAGAACGGGAAGTTGATAATTCTACCTGGTTCAATAGAAGAGCTGCTTAAGATTGCTGATGAAAAGTTTGGAGGATCAAAACCTACAAAAGTTATTAATACAGAGAATGCAGAGATAGATGACATAAGTGTAATTCGAGATGGCGATCACCTATTTCTCAATTGCAGCAACAATGGAAATTTGCTGTCATGA 2004 0.3952 MLLVVLVIYSAWICPFEFAFLTAKKDALFIIDNVIDGLFAIDIVLNFFVAYLDNHSYLLIDDHKRIAIRYISTWFIFDVCSTAPFQSISLLFTNYSSELCFELLNMLRLWRLRRVSSLFARLEKDIRFNYFWTRCTKLIAVTLFAVHCAGCFYYLMAEKYPDSEKTWIGAMYPNFRERETVRAASEFASRNHLPRHIQDQMLSHLCLRFKTEGLKQQETLNGLPKAIRSSIANHLFFPVVKEAYLFHGVSHDFLFQLVSEMEAEYFPPKEDVILQNESPTDLYVLVSGAVVSIRCLLNEGIHMPSDIPDASSVMLSVWMKDLICYMDGHDQVLGKSISGETFGEIGVLFYRPQPYTVRTTELSQILRLSRTSLMSAVQAYPADSQIIMDNLFKRLKGQEGMNSEYPHADPGMVLQEKLDRGKTKESFFHVRTNNSPEDPLFQEGRRYRDLTDSEVQLNKMTTEDSERDIHSAAFKGYQEMVDILLERDANARNPNFIGWTPKTLVEQQDKESTANLLINHENGGKLDEYRIELETPEILNRIRKDATQNRRHNDPRSINCPLENVYKNSYSSNPKCPSNREVARCTKKRVTIHLLGQCRSTSKGQNGKLIILPGSIEELLKIADEKFGGSKPTKVINTENAEIDDISVIRDGDHLFLNCSNNGNLLS 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g0229 667 Pfam Ion transport protein 2 168 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Sto2g0229 667 ProSiteProfiles KHA domain profile. 589 667 IPR021789 -
Sto2g0229 667 ProSiteProfiles cAMP/cGMP binding motif profile. 245 394 IPR000595 -
Sto2g0229 667 SUPERFAMILY Ankyrin repeat 468 521 IPR036770 -
Sto2g0229 667 SUPERFAMILY Voltage-gated potassium channels 2 172 - -
Sto2g0229 667 Gene3D Jelly Rolls 239 402 IPR014710 -
Sto2g0229 667 Gene3D Helix hairpin bin 175 235 - -
Sto2g0229 667 SUPERFAMILY cAMP-binding domain-like 176 395 IPR018490 -
Sto2g0229 667 SMART cnmp_10 245 392 IPR000595 -
Sto2g0229 667 Pfam KHA, dimerisation domain of potassium ion channel 588 657 IPR021789 -
Sto2g0229 667 Gene3D - 1 174 - -
Sto2g0229 667 PANTHER POTASSIUM CHANNEL AKT1 319 666 IPR045319 GO:0005249|GO:0006813
Sto2g0229 667 PANTHER POTASSIUM CHANNEL AKT1 178 296 IPR045319 GO:0005249|GO:0006813
Sto2g0229 667 PANTHER POTASSIUM CHANNEL AKT1 1 178 IPR045319 GO:0005249|GO:0006813
Sto2g0229 667 PANTHER INWARDLY RECTIFYING POTASSIUM CHANNEL SUBUNIT 178 296 - -
Sto2g0229 667 PANTHER INWARDLY RECTIFYING POTASSIUM CHANNEL SUBUNIT 1 178 - -
Sto2g0229 667 PANTHER INWARDLY RECTIFYING POTASSIUM CHANNEL SUBUNIT 319 666 - -
Sto2g0229 667 CDD CAP_ED 245 388 IPR000595 -
Sto2g0229 667 Gene3D - 468 524 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g0229 Sto-Chr2 1923874 1927810 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g0229 1 662 Ion Channels AT4G18290 42.432 1.42e-168 497
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g0229 K21867 - sspl:121743895 569.311