Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g0222 ATGAGCGAAGAAGGCAAGAATAGGGGGATCGCCGCCGATCTCCACAACCACCCTTACTACGGCACATTTCAAGGCGTCGCCAACTACTATCCTCCTGCTCCGCCGCTGCAGCAGCACTCTCAACAACCTCCGCCGGTTCACATCATAATGTTGATTGGTATTGTTGAAGGTTATATTATCGCTGAAGGAAGGCCAATAAGAGAACATCGTCTTCCTTGTTGTGGACTTGGGCTGGGATGGTTCTTGTTTATAATGGGTTTCTTTTTTGGAGGCCTTCCCTGGTATGTTGGAGCATTCATTCTACTATGTCTACGGATGGATTACCGAGAAAAGCCTGGATTGGTTGCATGCACAGTTGCTTTTCATCAATACCAGGTCGTTGGGAGGGCTCTGCCCACGGAAGCAGATGAGCACCCGAAGATTTACCGCATGAAGCTCTGGGCCACGAACGAGGTTCGCGCCAAGTCGAAGTTCTGGTATTTTTTGAGGAAATtgaagaaggtgaagaagaGCAATGGTCAAGTACTTGCTATCAATGAGatTTTTGAGAAGAACCCAACCAAGATCAAGAACTATGGCATCTGGTTGCGTTACCAGAGTAGGACTGGCTATCACAATATGTACAAGGAGTACCGTGATACCACTTTGAACGGTGCAGTCGAGCAGATGTATAATGAGATGGCTTCCCGTCACAGGGTGAGGTTCCCTTGCATTCAAATTATTAAGACCGCCACCATCCCAGCTAAGCTGTGCAAGAGGGAGAGCACCAAGCAATTCCACAACTCCAAAATCAAGTTCCCGTTGGTTTTCAAGAAAGTCAGGCCACCCACAAGGAAGCTTAAAACCACATACAAGGCCAAAAAGCCTAACTTGTTTATGTAA 882 0.4637 MSEEGKNRGIAADLHNHPYYGTFQGVANYYPPAPPLQQHSQQPPPVHIIMLIGIVEGYIIAEGRPIREHRLPCCGLGLGWFLFIMGFFFGGLPWYVGAFILLCLRMDYREKPGLVACTVAFHQYQVVGRALPTEADEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQVLAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYNEMASRHRVRFPCIQIIKTATIPAKLCKRESTKQFHNSKIKFPLVFKKVRPPTRKLKTTYKAKKPNLFM 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g0222 293 SUPERFAMILY RplX-like 186 261 - -
Sto2g0222 293 PANTHER 60S RIBOSOMAL PROTEIN L18A 253 293 - -
Sto2g0222 293 PANTHER 60S RIBOSOMAL PROTEIN L18A 118 252 - -
Sto2g0222 293 PANTHER 60S RIBOSOMAL PROTEIN L18A 253 293 IPR028877 -
Sto2g0222 293 PANTHER 60S RIBOSOMAL PROTEIN L18A 118 252 IPR028877 -
Sto2g0222 293 Pfam Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A 122 243 IPR023573 GO:0003735|GO:0005840|GO:0006412
Sto2g0222 293 Hamap 50S ribosomal protein L18Ae [rpl18a]. 121 184 IPR028877 -
Sto2g0222 293 Gene3D - 114 186 - -
Sto2g0222 293 Gene3D - 187 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g0222 Sto-Chr2 1849767 1856513 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g0222 121 293 Cytoplasmic Ribosomal Protein Gene Family AT2G34480 93.064 4.33e-119 339
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g0222 K02882 K22683 rcu:8264126 471.855