Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g0216 ATGAAGAGATCTGCCCAGAAGACTAATTCAGGAAAGAAACCCAAAGCAAAGCAAAAGAAGAATAACAACAAATTTGATGCCAAGAAGCCAAAGAAACCGCCCACCGCTTTCTTCTACTTCTTggaGGATTTTCGTAAAGAATTTAAAGAGCAGAATCCAGATATCAAGTCAATGTGTGAGATTGGCAAGGCTTGTGGAGAGAAGTGGAAAACAATGACTTATGAGGAGAAGGTTCAGTACTATGATATAGCCACAGAAAAACGAGCCGAATTTGACAGAGCAATGATTgaatttaacaagaaaatgGAAAATGGTGATTTAGAAGAATCCGATGAGGAATCGGAGTTTGATGAATAA 357 0.3641 MKRSAQKTNSGKKPKAKQKKNNNKFDAKKPKKPPTAFFYFLEDFRKEFKEQNPDIKSMCEIGKACGEKWKTMTYEEKVQYYDIATEKRAEFDRAMIEFNKKMENGDLEESDEESEFDE 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g0216 118 MobiDBLite consensus disorder prediction 1 19 - -
Sto2g0216 118 PANTHER HIGH MOBILITY GROUP B PROTEIN 14 5 117 - -
Sto2g0216 118 Pfam HMG (high mobility group) box 30 98 IPR009071 -
Sto2g0216 118 PANTHER HIGH MOBILITY GROUP B PROTEIN 12-RELATED 5 117 - -
Sto2g0216 118 SMART hmgende2 29 100 IPR009071 -
Sto2g0216 118 MobiDBLite consensus disorder prediction 1 32 - -
Sto2g0216 118 Gene3D High mobility group box domain 23 114 IPR036910 -
Sto2g0216 118 SUPERFAMILY HMG-box 24 104 IPR036910 -
Sto2g0216 118 CDD HMGB-UBF_HMG-box 30 95 - -
Sto2g0216 118 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 30 99 IPR009071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g0216 Sto-Chr2 1812080 1815953 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Sto2g0216 HMG_box 9.5e-19 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g0216 - - gmx:100809401 155.221