Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g0201 atgccTCATTCCCATTTGATAGCAGAAACAGGACAAGACAAGAAGAACACAATTCCAACATTGACAATGGAGCTTCTTACTCTCGTTGCTGAAAAAGTAATTGAATTTACATTAGTACCAATTGGACGGCAGTTGGGTTATTTGATCTCTTACCAAAGCAATGTGAAGGAGCTGAAGGATCAGTTTAAGGCGCTACAGAATTGTACACAAGTTGTGCAGAATAGGGTTGATGAGGCTCGAAGACAAGGTGAAGATATCGATGCCAGAGTTCAAGATTGGTTTAGCAGAGTAAACGAAATCACAGAGCTAGTAGACAAGTTATATGAAGAGGAAACTCATGCGAACACTAATTGTTCTTTCAAGTCTTGTCCTAATCTCTGGTTGCGGCATCAGATAAGTCGAAAAGCCAAGAAGATGACACAAGAAGTTGCAGAGATTGAGGTGAAAGCTGACAAGTTTGACAAGTTTGACAAATTTTCATCCTATAAGCCTCCAGATTTGGTAGGTGTACCACTTACTTCATCATCCACTGTTATTGAAGGGATGGAGTCAAGAATTTCAATTAGgaatcaagttttggaagcaTTGGCAGATCCTAATATTTATATGGTTGGACTGTGTGGGCTTCCTGGCGTGGGCAAAACTACCCTAGCCAAGGAAGTAGTTAGAAAAGTGAAGGAAGAAAATTTGTTTGACAAGGTGGTGTGGGTGAGAGTTGGGCAGAATCCAGACTCTAAGGGAATTCAATCACAGATTATAGACAATGTAGAAATGAAACTTGATGCGGAGAGTGTACTTGCAAGAGCTAGTCATTTGAATGAAAGGTTGAAGAGAGAAAGGAACCTGCTTGTAGTGTTGGATGACCTTTGGAAGAGACTTGACTTAGATGAAGTTGGGATTCCATTTGATGATAATCCCAAGAAAAAAATACCAATTGTTGATGAGAACAATAAGTGCAAAATTTTGTTAACTTCGAGACATGAAGATTTGTTATATAACCAAATGAATTGTAGAAGAAATATCAAGATGGATGTGATGTCTGAAGAGGAGGCCTTGAAGTTGTTTAAGAAGAATGCTGATCTCTCTGATGACTCCAATCATATTGATTTGTTATCTATGGCAGCTGAGGTTGTTAAACTATGTGGAGGATTGCCTCTAGCAATAGTTGCAGTTGCTAGACCATttcaaaataagagaaaaattagTGAATGGAGGTCTGCCTTGAATGAGTTAAAAAGACCTTTACGGAGAAACATGACTGGGATAAAGGAAGTGGATTCATCTTTGTTGTTCAGCTATGATCATTTAGATGCTGAGCTTCAATCTATTTTCTTGCTCTCTGCCATGTTATCCCATGACCCATTGATTATAGACCTGCTCATGTACTCTATGGGTTTGAGTTTACTTCAAGGTGTACATTCCATGAAAGATGCTCAAGATGCATTGGATGTTCTGGTAAGTAAGCTAAAAGCTTCAAGTTTATTGCTTAATAGCTTTTCTAATGATCGATTTACAATGCATGATGTGTTTCGCGAGTTTTCACTTTCAATTGCATCTGAAGTGCAACATGCCCTAGTGGTGTCCTTTCCCATGTTAGAAATAATGTATCTACATGAAATAAATAGTTCAATTACATCAATATGGGATGACCACCTTCCACTCAATTCCTTTGGCAACTTGAAGACATTGACTGTGACAGGGTGTGGTTCTTTAGTGAAATTAGTGCCTTTGCATGAACTAATTTCCTTAAGCAACTTGGAAGAAGTAGAGGTAACTAATTGTGAGTCATTAGAGATGGTGTTTGATTTTGATGATTTGAATAGTTATAAGGAGACACAGTTATCATCAAGTGTACCATTGAAAAAGTTAAAGCTGTATTCATTGCCGAAATTGACGCATGTGTGGAGTAACGACCCCCAACATATTTTCTCCTTCCCAAGTTTGCAGCAGGTGAAGGCTTATGATTGTGAAACACTGGAAAGTATGTTTCCTGCATCTATTGCTAAAGGTATGCTTCATCTTGAAGAGcttgaaatatttaattgtgGGATAGATGTGATTGTTGCAAAAGCTCAAGTTTCAGAATCAGGTGCCCCTACATTCGTATTCCCCAAGCTGTACACGTTACAACTTTGGAACCTCCCTAATTTGAAAAACTTGTATGGAGATAGACATACATCAGAATGGCCATGCCTTCAACACTTCATTATTCTTGATTGTGATGGATTGGAGATATTTGGGAAAGAAGACTCAAGTTTATCAAGCTTGCAAGAAGAGTCGCCATATGTAAAATATCCATTATTCTTCCATGAAAAGGAAATTCCCAACTTGAAGATGTTGACATTAGATGCAAAACAACTTGCTGTGATGTTAAGGAATGTCCAACTGGGTTTTGCACccagtttttttaatttgatggaGCTTAATGTATATGGTTCCGGTGTTTTCGGGGAGAGATTCAGCCTGGATCATCTCAGGGATGACTGCTTTCAGTCGGATTTGATTCTACCAAATCTTGAGAGTCTAGATGTCACAACTTTGGAGCTATCCTCTGAGATGAAAAAATTATGGGTTGAAAAACTTCCACATCACAAGCCTTTTAGTAAATTGGGAAGTTTAAGTGTGGACAATTGCGACTTCTTGTGTGAATATGTGATACCAGCACATTTAGTAAAATGCTTGAGCAATTTAGAAGAGTTGGAAGTGCGTAATTGCTACTCTGTAAAGGCAATATTTGATGTGAAAGGGATGGAATTGGATGAAGAGGCACGCACATCACTACCAAATATAGGTTTGAGAAAGTTGAAACTACATCATCTGCCAAACCTAAAGTGTGTGTGGACCGAAGACTATGATGGAATTAACTGCTTTCAACacttgcaagaattgcttgttTGTGAATGTGACAgcctaataaatatttttgtggaATCTACTGCTAAAGGACTTACCCAACTTGAGAAGTTGGAAATCGAATCTTGTGAGCTGCTTGAGGTAATTCCTAGATTAGAGGGACTAACGTTAAATCAGAAGGATGCCACCCTGCTAAGGGATGGTCAATTTCAAGCAGATCTCTTTGATAAAGTGGAAACTCTTTGTCTAGAAAGCTTTCTTGAAAAATCAGTAAGCTTTCCATATAGCTTCCTTGACAGATTTCCAAATCTCGAAGAACTTCGTGTGGAACATAGTTGCTTTGTGGAGATACTTCCATCTCAATCACAAACTGCATCATTTAAGAAATTATATGTTGGGTATTTGGATCAGCTCAAGACCATATGGGATGATGATTCTCAGGTTCAACCAATTCATCAAGATTTAGAGAGGCTTGAAGTTGAATGTTGTTGTAGCTTGATCAAGTTGACCCCACCTCTTGCTTCTTTTGAAAATCTAACTCAACTCATTGTGTCTGGTTGTCAACAACTAATCTATTTGGTAACAAGTTCAACAGCCAAAAGTTTGGTGAATCTTTACAGATTGGAGATAACAGATTGTGAAAGGATGGAGGAAATTGTAAGAAATGAGAGTGAAGAAGATGCAGAAGCAACAATCACATTCAAATTGTGGGGTTTGGAACTTACTGGCTTGACAAGCTTGAAGAGCTTTTGTTCAGAAAATCACACCCTCGAATTCCCAGAATTAGAAGGGGTAACTATAACCGAATGCCACCAGATGAAGATGTTTTGTCCGGGAGTAGTGGAAACACCAGAACTGTGGAGAGTAGAAATAGATGGGGATATATCATCTTTGAAGGGAGACCTTAACAACACAATAGAATTCTTACTCTTAAACAAGGATGGTACAAATATGTATAAAGAAGACTAA 3822 0.3728 MPHSHLIAETGQDKKNTIPTLTMELLTLVAEKVIEFTLVPIGRQLGYLISYQSNVKELKDQFKALQNCTQVVQNRVDEARRQGEDIDARVQDWFSRVNEITELVDKLYEEETHANTNCSFKSCPNLWLRHQISRKAKKMTQEVAEIEVKADKFDKFDKFSSYKPPDLVGVPLTSSSTVIEGMESRISIRNQVLEALADPNIYMVGLCGLPGVGKTTLAKEVVRKVKEENLFDKVVWVRVGQNPDSKGIQSQIIDNVEMKLDAESVLARASHLNERLKRERNLLVVLDDLWKRLDLDEVGIPFDDNPKKKIPIVDENNKCKILLTSRHEDLLYNQMNCRRNIKMDVMSEEEALKLFKKNADLSDDSNHIDLLSMAAEVVKLCGGLPLAIVAVARPFQNKRKISEWRSALNELKRPLRRNMTGIKEVDSSLLFSYDHLDAELQSIFLLSAMLSHDPLIIDLLMYSMGLSLLQGVHSMKDAQDALDVLVSKLKASSLLLNSFSNDRFTMHDVFREFSLSIASEVQHALVVSFPMLEIMYLHEINSSITSIWDDHLPLNSFGNLKTLTVTGCGSLVKLVPLHELISLSNLEEVEVTNCESLEMVFDFDDLNSYKETQLSSSVPLKKLKLYSLPKLTHVWSNDPQHIFSFPSLQQVKAYDCETLESMFPASIAKGMLHLEELEIFNCGIDVIVAKAQVSESGAPTFVFPKLYTLQLWNLPNLKNLYGDRHTSEWPCLQHFIILDCDGLEIFGKEDSSLSSLQEESPYVKYPLFFHEKEIPNLKMLTLDAKQLAVMLRNVQLGFAPSFFNLMELNVYGSGVFGERFSLDHLRDDCFQSDLILPNLESLDVTTLELSSEMKKLWVEKLPHHKPFSKLGSLSVDNCDFLCEYVIPAHLVKCLSNLEELEVRNCYSVKAIFDVKGMELDEEARTSLPNIGLRKLKLHHLPNLKCVWTEDYDGINCFQHLQELLVCECDSLINIFVESTAKGLTQLEKLEIESCELLEVIPRLEGLTLNQKDATLLRDGQFQADLFDKVETLCLESFLEKSVSFPYSFLDRFPNLEELRVEHSCFVEILPSQSQTASFKKLYVGYLDQLKTIWDDDSQVQPIHQDLERLEVECCCSLIKLTPPLASFENLTQLIVSGCQQLIYLVTSSTAKSLVNLYRLEITDCERMEEIVRNESEEDAEATITFKLWGLELTGLTSLKSFCSENHTLEFPELEGVTITECHQMKMFCPGVVETPELWRVEIDGDISSLKGDLNNTIEFLLLNKDGTNMYKED 1273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g0201 1273 PANTHER - 769 1006 - -
Sto2g0201 1273 PANTHER - 34 523 - -
Sto2g0201 1273 PANTHER - 1174 1228 - -
Sto2g0201 1273 PANTHER - 539 605 - -
Sto2g0201 1273 PANTHER - 1126 1171 - -
Sto2g0201 1273 PANTHER - 620 716 - -
Sto2g0201 1273 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 177 445 IPR027417 -
Sto2g0201 1273 Coils Coil 259 279 - -
Sto2g0201 1273 Coils Coil 48 68 - -
Sto2g0201 1273 Pfam NB-ARC domain 191 434 IPR002182 GO:0043531
Sto2g0201 1273 SUPERFAMILY RNI-like 618 1002 - -
Sto2g0201 1273 CDD AAA 181 229 - -
Sto2g0201 1273 SUPERFAMILY RNI-like 933 1169 - -
Sto2g0201 1273 Gene3D Ribonuclease Inhibitor 1010 1243 IPR032675 -
Sto2g0201 1273 Gene3D Ribonuclease Inhibitor 766 1009 IPR032675 -
Sto2g0201 1273 PRINTS Disease resistance protein signature 203 218 - -
Sto2g0201 1273 PRINTS Disease resistance protein signature 276 290 - -
Sto2g0201 1273 PRINTS Disease resistance protein signature 381 395 - -
Sto2g0201 1273 PRINTS Disease resistance protein signature 581 597 - -
Sto2g0201 1273 Gene3D Ribonuclease Inhibitor 512 760 IPR032675 -
Sto2g0201 1273 Gene3D - 346 437 IPR042197 -
Sto2g0201 1273 PANTHER DISEASE RESISTANCE RPS5-LIKE PROTEIN 769 1006 - -
Sto2g0201 1273 PANTHER DISEASE RESISTANCE RPS5-LIKE PROTEIN 1174 1228 - -
Sto2g0201 1273 PANTHER DISEASE RESISTANCE RPS5-LIKE PROTEIN 620 716 - -
Sto2g0201 1273 PANTHER DISEASE RESISTANCE RPS5-LIKE PROTEIN 539 605 - -
Sto2g0201 1273 PANTHER DISEASE RESISTANCE RPS5-LIKE PROTEIN 1126 1171 - -
Sto2g0201 1273 PANTHER DISEASE RESISTANCE RPS5-LIKE PROTEIN 34 523 - -
Sto2g0201 1273 Gene3D - 173 345 IPR027417 -
Sto2g0201 1273 Coils Coil 129 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g0201 Sto-Chr2 1699462 1707438 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g0201 185 517 WRKY Transcription Factor Family AT5G45050 28.280 3.12e-12 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g0201 - - gab:108471406 456.062