Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g0198 ATGGCTGCTTCAACAATGGCTCTCTCTTCTCCATCATTCGCTGGGCAGGCAATCAAGCTTGCACCCTCCACCCCTGAACTTGGCAATGGCCGAGTCACAATGAGGAAGACTGCCTCTAAGCCTGTCTCCTCTGGAAGCCCATGGTACGGCCCAGACCGTGTCTTGTACTTGGGCCCATTGTCCGGTGAGCCCCCATCCTACTTGACTGGTGAGTTCCCAGGTGACTATGGTTGGGACACTGCTGGGCTTTCTGCTGACCCAGAGACCTTCGCCAAGAACCGTGAGCTTGAAGTCATCCACTGCAGATGGGCTATGCTTGGAGCTTTGGGCTGTGTCTTCCCTGAGCTCTTGGCCCGCAACGGTGTCAAATTCGGTGAGGCTGTTTGGTTCAAGGCTGGATCCCAGATCTTCAGTGAGGGTGGGCTTGACTACTTGGGCAACCCAAGCCTGATCCACGCACAAAGCATCCTTGCCATCTGGGCCTGCCAGGTGATCTTGATGGGCGCTGTTGAGGGTTATCGTATTGCCGGTGGGCCTCTCGGTGAGGTGACAGACCCATTGTACCCAGGTGGAAGCTTTGATCCATTGGGCCTTGCTGATGACCCAGAGGCTTTTGCTGAATTGAAGGTGAAGGAGATCAAGAATGGCAGATTAGCTATGTTCTCAATGTTTGGATTCTTTGTTCAAGCCATTGTGACAGGAAAGGGACCATTGGAGAACCTTGCAGATCACCTTGCAGACCCAGTGAACAACAATGCTTGGGCCTATGCCACCAACTTTGTCCCTGGAAAAAATTCTTCAATGGCTGCTTCAACAATGGCTCTCTCTTCTCCATCATTCGCTGGGCAGGCAATCAAGCTTGCACCTTCCACTCCTGAACTTGGCAATGGCCGAGTTACAATGAGGAAGACTGCCTCTAAGCCTGCTTCCTCTGGAAGCCCATGGTACGGCCCAGACCGTGTCTTGTACTTGGGCCCATTGTCCGGTGAGCCCCCATCCTACTTGACTGGTGAGTTCCCAGGTGACTACGGTTGGGACACTGCTGGGCTTTCTGCTGACCCAGAGACCTTCGCCAAGAACCGTGAGCTTGAAGTCATCCACTGCAGATGGGCTATGCTTGGAGCTTTGGGCTGTGTCTTCCCTGAGCTCTTGGCCCGCAACGGTGTCAAATTCGGTGAGGCTGTTTGGTTCAAGGCTGGATCCCAGATCTTCAGTGAGGGTGGGCTTGACTACTTGGGCAACCCAAGCCTGATCCACGCACAAAGCATCCTTGCCATCTGGGCCTGCCAAGTGATCTTGATGGGCGCTGTTGAGGGTTACCGTATTGCCGGTGGGCCTCTCGGTGAGGTGACCGACCCATTGTACCCAGGTGGAAGCTTTGACCCATTGGGCCTTGCTGATGACCCAGAGGCTTTTGCTGAGTTGAAGGTGAAGGAGATCAAGAATGGTAGATTGGCTATGTTCTCAATGTTTGGATTCTTTGTTCAGGCTATTGTGACCGGAAAGGGCCCATTGGAGAACCTTGCAGATCATCTTGCAGACCCAGTCAACAACAATGCTTGGGCCTATGCAACCAACTTTGTCCCTGGAAAGTGA 1596 0.5345 MAASTMALSSPSFAGQAIKLAPSTPELGNGRVTMRKTASKPVSSGSPWYGPDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVILMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGKNSSMAASTMALSSPSFAGQAIKLAPSTPELGNGRVTMRKTASKPASSGSPWYGPDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVILMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g0198 531 MobiDBLite consensus disorder prediction 24 45 - -
Sto2g0198 531 SUPERFAMILY Chlorophyll a-b binding protein 314 528 - -
Sto2g0198 531 Pfam Chlorophyll A-B binding protein 64 230 IPR022796 -
Sto2g0198 531 Pfam Chlorophyll A-B binding protein 331 497 IPR022796 -
Sto2g0198 531 Gene3D Chlorophyll a/b binding protein domain 55 257 - -
Sto2g0198 531 Gene3D Chlorophyll a/b binding protein domain 322 524 - -
Sto2g0198 531 SUPERFAMILY Chlorophyll a-b binding protein 47 261 - -
Sto2g0198 531 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 1 264 - -
Sto2g0198 531 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 267 531 - -
Sto2g0198 531 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 264 IPR001344 GO:0009765|GO:0016020
Sto2g0198 531 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 267 531 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g0198 Sto-Chr2 1643099 1650366 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g0198 268 531 Chloroplast and Mitochondria Gene Families AT1G29930 88.015 1.78e-167 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g0198 K08912 - ncol:116257149 960.288