Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g0197 ATGGCTGCCTCTACTATGGCTCTTTCCTCCCCATCTTTTGCCGGCCGGGTCTCCATGAGGAAGACTGCCTCTAAGCCTGTCTCCTCTGGAAGCCCATGGTACGGCCCAGACCGTGTCTTGTACTTGGGTCCATTGTCCGGTGAGCCCCCATCCTACTTGACCGGTGAGTTCCCAGGTGACTACGGCTGGGACACTGCTGGGCTTTCTGCTGACCCAGAGACCTTCGCCAAGAACCGTGAGCTTGAAGTCATTCACTGCAGATGGGCTATGCTTGCTGTTTGGTTCAAGGCCGGATCCCAAATCTTCAGTGAGGGTGGGCTTGACTACTTGGGCAACCCAAGCTTGATCCACGCACAGAGCATCCTTGCCATCTGGGCTTGCCAAGTGATCTTGATGGGCGCCGTTGAGGGTTACCGTATTGCCGGTGGGCCTCTCGGTGAGGTGACCGACCCATTGTACCCAGGCGGAAGCTTTGACCCATTGGGCCTTGCTGATGACCCAGAGGCTTTTGCTGAGTTGAAGGTGAAGGAGATCAAGAATGGCAGATTAGCTATGTTCTCAATGTTTGGATTCTTTGTTCAAGCCATTGTGACCGGAAAGGGCCCATTGGAGAACCTTGCAGATCACCTTGCAGACCCAGTAAACAACAATGCTTGGGCCTATGCCACCAACTTTGTCCCTGGAAAGTGA 690 0.5435 MAASTMALSSPSFAGRVSMRKTASKPVSSGSPWYGPDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVILMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g0197 229 Pfam Chlorophyll A-B binding protein 49 195 IPR022796 -
Sto2g0197 229 Gene3D Chlorophyll a/b binding protein domain 93 222 - -
Sto2g0197 229 Gene3D Chlorophyll a/b binding protein domain 40 92 - -
Sto2g0197 229 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 15 91 IPR001344 GO:0009765|GO:0016020
Sto2g0197 229 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 92 229 IPR001344 GO:0009765|GO:0016020
Sto2g0197 229 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 15 91 - -
Sto2g0197 229 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 92 229 - -
Sto2g0197 229 SUPERFAMILY Chlorophyll a-b binding protein 32 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g0197 Sto-Chr2 1639597 1640385 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g0197 1 229 Chloroplast and Mitochondria Gene Families AT2G34420 78.113 6.64e-143 398
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g0197 K08912 - oeu:111402246 445.662