Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g0190 ATGTCTGATGAACATAATTATAAAGATCTATACTACCAAGGTGGATCCACATCCACCATGTacacttcatcatcatcatcatcatcacaagCCTATGATCCATCTTACATGAGCTTCATTAGTGAGTATCTCCAATTAGGAGCAATGgataataattacaattcacTCATTCCAACTTCCTTTCCCTTCTCTCCTTCTTCATTAGACCTATTTCCATCTCCTGATCATCATCAAGGCAATAATGACAATATTACGACCCTAAAGGCGCCCGAAGACGGAGGAGATTTAGGCGGCGGCGGCGAAACTAGTCCGGTGACCCAAAACTCATCTCTCTCATCCTCTTCTAATTCTGAAGCTGTGGGTGAAGAAGATTCAGGCAACAAGACCAACACAGAAGATCAAAGCCAGGtcaaaggagaagaagaagccaAAAAATTAGGATTTGCTTTCATGACAAAGAGTGAGGTGGATCAGCTTGAAGATGGATATCGATGGAGAAAATATGGACAGAAAGCTGTCAAGAATAGCCCTTATCCAAGATGCACAACACAGAAATGTAGAGTGAAGAAACGTGTGGAGAGGTCGTTTGAAGATCCAACAACTGTGATAACGACATACGAAGGTCAGCACAACCATCCTGTCCCCACTTCCCTCAGAGCCACCTATAACGCTGCGCCGCCCTGCATCCCTCATGTGTTcacaccttcttcttcttcttcttctcatcaattatataattataattcctCTTTTATCCCTCAACAACATCATTTCCTTAATAATCTTCTCCACCATAACAACATCATCACccctcatcatcatcactacTACCataactataataataataattcacaaaACTATGCTAACCCTAATTCTCTACATCATcctgatcagcttcactaccaTCCTAATATATCTCATGACGACTATGGACTCCTTCAAGACGTTGTCCCTTCTTCTATGTTCCTCAAACAAGAGCCACCAGAATAA 993 0.3505 MSDEHNYKDLYYQGGSTSTMYTSSSSSSSQAYDPSYMSFISEYLQLGAMDNNYNSLIPTSFPFSPSSLDLFPSPDHHQGNNDNITTLKAPEDGGDLGGGGETSPVTQNSSLSSSSNSEAVGEEDSGNKTNTEDQSQVKGEEEAKKLGFAFMTKSEVDQLEDGYRWRKYGQKAVKNSPYPRCTTQKCRVKKRVERSFEDPTTVITTYEGQHNHPVPTSLRATYNAAPPCIPHVFTPSSSSSSHQLYNYNSSFIPQQHHFLNNLLHHNNIITPHHHHYYHNYNNNNSQNYANPNSLHHPDQLHYHPNISHDDYGLLQDVVPSSMFLKQEPPE 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g0190 330 Pfam WRKY DNA -binding domain 160 213 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto2g0190 330 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 22 319 IPR044810 GO:0003700
Sto2g0190 330 MobiDBLite consensus disorder prediction 282 306 - -
Sto2g0190 330 MobiDBLite consensus disorder prediction 11 27 - -
Sto2g0190 330 MobiDBLite consensus disorder prediction 68 141 - -
Sto2g0190 330 PANTHER WRKY TRANSCRIPTION FACTOR 28-RELATED 22 319 - -
Sto2g0190 330 MobiDBLite consensus disorder prediction 68 87 - -
Sto2g0190 330 MobiDBLite consensus disorder prediction 101 124 - -
Sto2g0190 330 SMART WRKY_cls 159 214 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto2g0190 330 MobiDBLite consensus disorder prediction 1 27 - -
Sto2g0190 330 SUPERFAMILY WRKY DNA-binding domain 151 215 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto2g0190 330 MobiDBLite consensus disorder prediction 125 141 - -
Sto2g0190 330 Gene3D WRKY domain 145 216 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto2g0190 330 ProSiteProfiles WRKY domain profile. 154 215 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g0190 Sto-Chr2 1584138 1586260 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g0190 28 328 WRKY Transcription Factor Family AT4G18170 38.318 3.99e-47 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sto2g0190 WRKY 9.9e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g0190 - - qsu:111998523 201.83